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The map label for this gene is dedA [H]

Identifier: 89256110

GI number: 89256110

Start: 712108

End: 712755

Strand: Reverse

Name: dedA [H]

Synonym: FTL_0721

Alternate gene names: 89256110

Gene position: 712755-712108 (Counterclockwise)

Preceding gene: 89256111

Following gene: 89256106

Centisome position: 37.59

GC content: 32.1

Gene sequence:

>648_bases
ATGGATACAATCTCGGCATTATTAAATATTGTCTTGCATCTAGATCAATTTATTAGTACTTACATAAATATACTAGGCGA
CTGGACATACTTACTGCTTTTTTTAGTAATTTTTTGTGAAACCGGACTTGTGATAACTCCTTTTTTGCCAGGAGATTCAT
TACTTTTTGCTATAGGTCTTACTGGAGCTGCAACAACCCTTAATGTTCACTTAGTAGCCCCGATATTAGTAGCAGCTGCT
GTTTGTGGAGATTCTTGTAACTATTTCTTAGGTCGTATGATTGGTAAAAGAATCTTTAAAGATAATGCAAAAATTCTTAA
AACTGCACATCTTTTAAAAGCTCAAGAATTCTTTAACAAATATGGGTCAGCAGCTATTATACTTGCTAGATTTACCCCAC
TTGTACGTACATTTATGCCTTTTACAGCTGGTATGGCAAGGATGAGATATACTAAATTTGTTGCAATGGGTATCATTGGT
GCGTTTATCTGGGTTTATTCTATTGTTTATTTGGCATTTTTCTTTAGTAACAATGCTTTTGTTAAAAAGTATTTTGGTTT
ATTCATTATTTTAATTGTAGTTGTTTCTTTGATACCACCGACAATATCTTTTATCAAAGCTTTCAAGAACAAATTACTTG
ATCGTTAA

Upstream 100 bases:

>100_bases
CTTATCAAGGGTATTATCAATAAAATAAAAGCAAAAAGAACTTAACCTTTAGAAATTATTTTTTTATAATCTAACGACAA
AACATTCAAAAGCATAACTC

Downstream 100 bases:

>100_bases
TATAATCAGCAAATCCATTGATTTAATTTAAAACAAATTTATTGTTGCTTTAAAAATGATTCTTATGCCTAGAATCTATT
TTTTAAGATTTAAATAGTCG

Product: DedA family protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDTISALLNIVLHLDQFISTYINILGDWTYLLLFLVIFCETGLVITPFLPGDSLLFAIGLTGAATTLNVHLVAPILVAAA
VCGDSCNYFLGRMIGKRIFKDNAKILKTAHLLKAQEFFNKYGSAAIILARFTPLVRTFMPFTAGMARMRYTKFVAMGIIG
AFIWVYSIVYLAFFFSNNAFVKKYFGLFIILIVVVSLIPPTISFIKAFKNKLLDR

Sequences:

>Translated_215_residues
MDTISALLNIVLHLDQFISTYINILGDWTYLLLFLVIFCETGLVITPFLPGDSLLFAIGLTGAATTLNVHLVAPILVAAA
VCGDSCNYFLGRMIGKRIFKDNAKILKTAHLLKAQEFFNKYGSAAIILARFTPLVRTFMPFTAGMARMRYTKFVAMGIIG
AFIWVYSIVYLAFFFSNNAFVKKYFGLFIILIVVVSLIPPTISFIKAFKNKLLDR
>Mature_215_residues
MDTISALLNIVLHLDQFISTYINILGDWTYLLLFLVIFCETGLVITPFLPGDSLLFAIGLTGAATTLNVHLVAPILVAAA
VCGDSCNYFLGRMIGKRIFKDNAKILKTAHLLKAQEFFNKYGSAAIILARFTPLVRTFMPFTAGMARMRYTKFVAMGIIG
AFIWVYSIVYLAFFFSNNAFVKKYFGLFIILIVVVSLIPPTISFIKAFKNKLLDR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=209, Percent_Identity=44.4976076555024, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI1789481, Length=156, Percent_Identity=29.4871794871795, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789384, Length=156, Percent_Identity=30.1282051282051, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24018; Mature: 24018

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTISALLNIVLHLDQFISTYINILGDWTYLLLFLVIFCETGLVITPFLPGDSLLFAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCC
TGAATTLNVHLVAPILVAAAVCGDSCNYFLGRMIGKRIFKDNAKILKTAHLLKAQEFFNK
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YGSAAIILARFTPLVRTFMPFTAGMARMRYTKFVAMGIIGAFIWVYSIVYLAFFFSNNAF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VKKYFGLFIILIVVVSLIPPTISFIKAFKNKLLDR
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTISALLNIVLHLDQFISTYINILGDWTYLLLFLVIFCETGLVITPFLPGDSLLFAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCC
TGAATTLNVHLVAPILVAAAVCGDSCNYFLGRMIGKRIFKDNAKILKTAHLLKAQEFFNK
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YGSAAIILARFTPLVRTFMPFTAGMARMRYTKFVAMGIIGAFIWVYSIVYLAFFFSNNAF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VKKYFGLFIILIVVVSLIPPTISFIKAFKNKLLDR
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]