Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256053
Identifier: 89256053
GI number: 89256053
Start: 645152
End: 645520
Strand: Direct
Name: 89256053
Synonym: FTL_0663
Alternate gene names: NA
Gene position: 645152-645520 (Clockwise)
Preceding gene: 89256051
Following gene: 89256055
Centisome position: 34.03
GC content: 25.2
Gene sequence:
>369_bases ATGATTAGAAAAAGTATTTTAGTAGAAAATCAAGAAATCAAAGACTTATTATCTGTTATTAAACAACACTATGCATCTGA TAATAGAAAAACTATTCAAGAAGTAAGTCTGAACCATGTGGTTAATAATGTTTATAAGCAAAATATAAAAAATTATATTA TAGAGAAGTGGTATACTCTTGAAACTAAAGTTGGTCATCAAATTACACTTCTAGAAAATAACTATAATAAGAGTATTATC AATAAGTTATATAAAAAATCTCGAGACCTTAATTTTGTGATTAAAACTAGACCTGATGATTCATCAAGAGAATTACATGA TTCAATCAAGAGCGCATCTAATATAGATGTGGTAATAAAAGAGTTCTAA
Upstream 100 bases:
>100_bases TTCAAAAATAGTGCAATAATACTTCCCTTTATGGCAAAAAGTGATTAATATTTAAAAGTGTGATAAAACTGCACTTTATA TAAAATGAAGGAGCTTGAAA
Downstream 100 bases:
>100_bases TTTTTTTGTGAAAAATAGATATTAATAGTATTATCTATTTGTATACACTTTCGAATTCTCCAAAACTTTTTTACCTAAAT AGACAGAAAGAATTATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MIRKSILVENQEIKDLLSVIKQHYASDNRKTIQEVSLNHVVNNVYKQNIKNYIIEKWYTLETKVGHQITLLENNYNKSII NKLYKKSRDLNFVIKTRPDDSSRELHDSIKSASNIDVVIKEF
Sequences:
>Translated_122_residues MIRKSILVENQEIKDLLSVIKQHYASDNRKTIQEVSLNHVVNNVYKQNIKNYIIEKWYTLETKVGHQITLLENNYNKSII NKLYKKSRDLNFVIKTRPDDSSRELHDSIKSASNIDVVIKEF >Mature_122_residues MIRKSILVENQEIKDLLSVIKQHYASDNRKTIQEVSLNHVVNNVYKQNIKNYIIEKWYTLETKVGHQITLLENNYNKSII NKLYKKSRDLNFVIKTRPDDSSRELHDSIKSASNIDVVIKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14404; Mature: 14404
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKSILVENQEIKDLLSVIKQHYASDNRKTIQEVSLNHVVNNVYKQNIKNYIIEKWYTL CCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ETKVGHQITLLENNYNKSIINKLYKKSRDLNFVIKTRPDDSSRELHDSIKSASNIDVVIK EECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEE EF CC >Mature Secondary Structure MIRKSILVENQEIKDLLSVIKQHYASDNRKTIQEVSLNHVVNNVYKQNIKNYIIEKWYTL CCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ETKVGHQITLLENNYNKSIINKLYKKSRDLNFVIKTRPDDSSRELHDSIKSASNIDVVIK EECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEE EF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA