Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256051
Identifier: 89256051
GI number: 89256051
Start: 642124
End: 643758
Strand: Direct
Name: 89256051
Synonym: FTL_0661
Alternate gene names: NA
Gene position: 642124-643758 (Clockwise)
Preceding gene: 89256050
Following gene: 89256053
Centisome position: 33.87
GC content: 31.44
Gene sequence:
>1635_bases ATGCGTTTACGAAAAATATTCTTACTAACATCAATATGTACGGCTACACTTGCTACAGTCAATTTATATGCTACACCAAC TACTACTAATATTCAGCAGTTAAGTAGCCAACAGCAAGATCGTATTAGAAGTATGCTCAAAAGTAACCTTGATTCGCTAT TCCCATATCAAACACAGATAACTATAGGGAAAATTGATCAAGATAATAAGGGAACTGTTGTAGCATCAAATATTCTCATA ATGAGCAACGACTCAGAAAACCCGAATCTAACTATAAATAAACTTATCTTTAAAGGTTTACATGCTAATCAAGCAATCAA CAATAATTTTACTATCAAAGTAGAGGGCTTGAGTATAGCTAATCTAGCAGCAGCAGTAGCTAATAGTAATCTAGTAAGTT CGGAAGTTGATCCTAAACAGTTAGCTGATAATCAAGGATTATTTAGCATTGCTATGAATAGTTTGGGGCAAACTATCTAT AATTTAGAAATTAATTATAACTATAACAATAGTACAATTGACTATAGTCTTGATTCTACGATAAATAATAAGCCATTACT AAAAGCAGCAGCGCAATTAACAGATATCGATTTGTCTAATACTAATGTTAACACAGATTTTCTAGCGACTCTGCTTAATG AATCAATGAGTGCTAAGATTAAAACACTTGAGTTTGATGCTAATTTCTCAGAAGTTTTAAGAGATATTACTAATAAGTAT CTTGGTAAAGATTACAAGCAAACGCCTATTTTAAACATTAAAGCTCAGTTGGGTAAAAATCCAGACCAGTTAATGTTAAA TGTTGATGGTAAGTTGGGTTCTCAAAATTATGCTAAATATAATATTATTATTAATGGTATTAATTTAGCAAGCTCAACAA TCAATGATATTGTTGCTGGTTCTAGTAATGCTTTAGATAATGCTTACATACAGTCAAGCATGTCTAGCTCGCGGATTGAG CTTAATTTTGCAAGAGACTTCTTCCCTAAAGGTTCACCAATAATACAAGTATTTTCAGCTTTAGACAAAAACAACATTAG TTTTACGATTGTTTCGCAGCATCAGTTTGAGGGTACTAGTTATAATACTAACTTTTATCTAAAGGCGGATGGCTTGGCTA GCTTAAGTGCCAATGCTAATGCAGTAGTAAATGGTAAGCTAAATTTACTGCCATATCTTGGTATAAATGCACAAAACCAA ACTAATCTGTATGATTGTACTAATCAGTTATGTTTAAGTAATGTTGATGTTAAATTTGCTAACTATGGATTACTCGAAAA AGTAGCTCGTCAGACAAACAATGATCCAAATACAACACCACAGCAAATTTTAGGATCTTACGGTGCATTATTACAACTTT TTGCAGTACAACAGCAGGATAAGTTTTTACAGCAAACATTATCAGCATTTGCTATATTTTTGCAAAATCCTAAAAATATA GCTATTCATGCTAAAGCAAATAAACCAGTTAATGAAAATGCATTACTGAACATGCTAGTTGCTGATGCTAAAACACTTAA AAAGTACAAACCAGTCAATAGTAATGGTAATGTCGATCTTAGAAATAACCCTAATGTTAAGCTCATAAACAATATTCAAA ATATCTTCAAAATTAGTTTTGATGTTAATAAATAG
Upstream 100 bases:
>100_bases CCAATTGCTTTTGAAACTAATTGTGGCGCATTTTCATTGCGTAAAAAAGATTTAGAGTTTTTAAAATTAGAAAAAATAAA TTAAAAAAAGAGGCTATAAG
Downstream 100 bases:
>100_bases TCAAAATATTTATATAAATAATCTAAATCTTTGAAAAATATAATTCTTGCTGATTTAAAGCAGTATCACTATTGACAACT ACTCAAAATAAGGTAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MRLRKIFLLTSICTATLATVNLYATPTTTNIQQLSSQQQDRIRSMLKSNLDSLFPYQTQITIGKIDQDNKGTVVASNILI MSNDSENPNLTINKLIFKGLHANQAINNNFTIKVEGLSIANLAAAVANSNLVSSEVDPKQLADNQGLFSIAMNSLGQTIY NLEINYNYNNSTIDYSLDSTINNKPLLKAAAQLTDIDLSNTNVNTDFLATLLNESMSAKIKTLEFDANFSEVLRDITNKY LGKDYKQTPILNIKAQLGKNPDQLMLNVDGKLGSQNYAKYNIIINGINLASSTINDIVAGSSNALDNAYIQSSMSSSRIE LNFARDFFPKGSPIIQVFSALDKNNISFTIVSQHQFEGTSYNTNFYLKADGLASLSANANAVVNGKLNLLPYLGINAQNQ TNLYDCTNQLCLSNVDVKFANYGLLEKVARQTNNDPNTTPQQILGSYGALLQLFAVQQQDKFLQQTLSAFAIFLQNPKNI AIHAKANKPVNENALLNMLVADAKTLKKYKPVNSNGNVDLRNNPNVKLINNIQNIFKISFDVNK
Sequences:
>Translated_544_residues MRLRKIFLLTSICTATLATVNLYATPTTTNIQQLSSQQQDRIRSMLKSNLDSLFPYQTQITIGKIDQDNKGTVVASNILI MSNDSENPNLTINKLIFKGLHANQAINNNFTIKVEGLSIANLAAAVANSNLVSSEVDPKQLADNQGLFSIAMNSLGQTIY NLEINYNYNNSTIDYSLDSTINNKPLLKAAAQLTDIDLSNTNVNTDFLATLLNESMSAKIKTLEFDANFSEVLRDITNKY LGKDYKQTPILNIKAQLGKNPDQLMLNVDGKLGSQNYAKYNIIINGINLASSTINDIVAGSSNALDNAYIQSSMSSSRIE LNFARDFFPKGSPIIQVFSALDKNNISFTIVSQHQFEGTSYNTNFYLKADGLASLSANANAVVNGKLNLLPYLGINAQNQ TNLYDCTNQLCLSNVDVKFANYGLLEKVARQTNNDPNTTPQQILGSYGALLQLFAVQQQDKFLQQTLSAFAIFLQNPKNI AIHAKANKPVNENALLNMLVADAKTLKKYKPVNSNGNVDLRNNPNVKLINNIQNIFKISFDVNK >Mature_544_residues MRLRKIFLLTSICTATLATVNLYATPTTTNIQQLSSQQQDRIRSMLKSNLDSLFPYQTQITIGKIDQDNKGTVVASNILI MSNDSENPNLTINKLIFKGLHANQAINNNFTIKVEGLSIANLAAAVANSNLVSSEVDPKQLADNQGLFSIAMNSLGQTIY NLEINYNYNNSTIDYSLDSTINNKPLLKAAAQLTDIDLSNTNVNTDFLATLLNESMSAKIKTLEFDANFSEVLRDITNKY LGKDYKQTPILNIKAQLGKNPDQLMLNVDGKLGSQNYAKYNIIINGINLASSTINDIVAGSSNALDNAYIQSSMSSSRIE LNFARDFFPKGSPIIQVFSALDKNNISFTIVSQHQFEGTSYNTNFYLKADGLASLSANANAVVNGKLNLLPYLGINAQNQ TNLYDCTNQLCLSNVDVKFANYGLLEKVARQTNNDPNTTPQQILGSYGALLQLFAVQQQDKFLQQTLSAFAIFLQNPKNI AIHAKANKPVNENALLNMLVADAKTLKKYKPVNSNGNVDLRNNPNVKLINNIQNIFKISFDVNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59930; Mature: 59930
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRKIFLLTSICTATLATVNLYATPTTTNIQQLSSQQQDRIRSMLKSNLDSLFPYQTQI CCHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TIGKIDQDNKGTVVASNILIMSNDSENPNLTINKLIFKGLHANQAINNNFTIKVEGLSIA EEEECCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCEEEEECCCCHH NLAAAVANSNLVSSEVDPKQLADNQGLFSIAMNSLGQTIYNLEINYNYNNSTIDYSLDST HHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEEECCC INNKPLLKAAAQLTDIDLSNTNVNTDFLATLLNESMSAKIKTLEFDANFSEVLRDITNKY CCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHCCEEEEEEECCCHHHHHHHHHHHH LGKDYKQTPILNIKAQLGKNPDQLMLNVDGKLGSQNYAKYNIIINGINLASSTINDIVAG HCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHCC SSNALDNAYIQSSMSSSRIELNFARDFFPKGSPIIQVFSALDKNNISFTIVSQHQFEGTS CCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCC YNTNFYLKADGLASLSANANAVVNGKLNLLPYLGINAQNQTNLYDCTNQLCLSNVDVKFA CCCEEEEEECCCEEECCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEC NYGLLEKVARQTNNDPNTTPQQILGSYGALLQLFAVQQQDKFLQQTLSAFAIFLQNPKNI CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE AIHAKANKPVNENALLNMLVADAKTLKKYKPVNSNGNVDLRNNPNVKLINNIQNIFKISF EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCEEEEEEE DVNK ECCC >Mature Secondary Structure MRLRKIFLLTSICTATLATVNLYATPTTTNIQQLSSQQQDRIRSMLKSNLDSLFPYQTQI CCHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TIGKIDQDNKGTVVASNILIMSNDSENPNLTINKLIFKGLHANQAINNNFTIKVEGLSIA EEEECCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCEEEEECCCCHH NLAAAVANSNLVSSEVDPKQLADNQGLFSIAMNSLGQTIYNLEINYNYNNSTIDYSLDST HHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEEECCC INNKPLLKAAAQLTDIDLSNTNVNTDFLATLLNESMSAKIKTLEFDANFSEVLRDITNKY CCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHCCEEEEEEECCCHHHHHHHHHHHH LGKDYKQTPILNIKAQLGKNPDQLMLNVDGKLGSQNYAKYNIIINGINLASSTINDIVAG HCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHHHHCC SSNALDNAYIQSSMSSSRIELNFARDFFPKGSPIIQVFSALDKNNISFTIVSQHQFEGTS CCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCC YNTNFYLKADGLASLSANANAVVNGKLNLLPYLGINAQNQTNLYDCTNQLCLSNVDVKFA CCCEEEEEECCCEEECCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEC NYGLLEKVARQTNNDPNTTPQQILGSYGALLQLFAVQQQDKFLQQTLSAFAIFLQNPKNI CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE AIHAKANKPVNENALLNMLVADAKTLKKYKPVNSNGNVDLRNNPNVKLINNIQNIFKISF EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCEEEEEEE DVNK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA