| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256033
Identifier: 89256033
GI number: 89256033
Start: 626176
End: 626673
Strand: Reverse
Name: 89256033
Synonym: FTL_0642
Alternate gene names: NA
Gene position: 626673-626176 (Counterclockwise)
Preceding gene: 89256035
Following gene: 89256032
Centisome position: 33.05
GC content: 32.93
Gene sequence:
>498_bases ATGAACTTTAATACTACTAAAATAGCAAAGTCCATTCTGTCAATATCTGTAATAAAATGTTCTCGACTAAAACACTTTAT ACTATTTAGTGAGGCGATTATGAAATTTAATATTATCTGCATGCTAGGTTTAGCATTTATCCTTAGCTCGTGTGTGAGTA ATACTAACCCAGAAAATGTTGGTTTTGTGAAAACTCCATATACCTCTGGTAATGTCTCTTTGACACTTAAAAAGGGAGTA ACTACCAAAGATCAAGTTATAAATGCTTTTGGTTCTCCTAATATAGTTACTCAAAATGCAGATGGTGAATCAGTATGGAC ATACCAAACCAATGCAACTGTTGAAAACAATGCTGCAAGAGATGGGTTTTTAACTCTTCTCATCACAGGTGAAAATACTG AAGAGTCTGGATTTATGCAATCGCAAAAAACCATGACTATTATTACCTTCAAAGGTAATGTTGTTTCTGACTGTAAATCA TTATCAACTAACTTCTAG
Upstream 100 bases:
>100_bases AGCTCTAGCGGTAGTTTTCATAATTTTATGTAGATGTAATTGATTAGCGAATTTTATAGCTTGTGATTATACCTTATTAA CAATAATATATATAGTTCTT
Downstream 100 bases:
>100_bases ATGAGGTTTCTATAAAATGCTAAAAAAATTAACTACTTAGTTTATTTCATAGTTTTAGTTTTGTCTGGTTGCGCATCTTC AGGACCACAACAACCTAACC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNFNTTKIAKSILSISVIKCSRLKHFILFSEAIMKFNIICMLGLAFILSSCVSNTNPENVGFVKTPYTSGNVSLTLKKGV TTKDQVINAFGSPNIVTQNADGESVWTYQTNATVENNAARDGFLTLLITGENTEESGFMQSQKTMTIITFKGNVVSDCKS LSTNF
Sequences:
>Translated_165_residues MNFNTTKIAKSILSISVIKCSRLKHFILFSEAIMKFNIICMLGLAFILSSCVSNTNPENVGFVKTPYTSGNVSLTLKKGV TTKDQVINAFGSPNIVTQNADGESVWTYQTNATVENNAARDGFLTLLITGENTEESGFMQSQKTMTIITFKGNVVSDCKS LSTNF >Mature_165_residues MNFNTTKIAKSILSISVIKCSRLKHFILFSEAIMKFNIICMLGLAFILSSCVSNTNPENVGFVKTPYTSGNVSLTLKKGV TTKDQVINAFGSPNIVTQNADGESVWTYQTNATVENNAARDGFLTLLITGENTEESGFMQSQKTMTIITFKGNVVSDCKS LSTNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18000; Mature: 18000
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNTTKIAKSILSISVIKCSRLKHFILFSEAIMKFNIICMLGLAFILSSCVSNTNPENV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GFVKTPYTSGNVSLTLKKGVTTKDQVINAFGSPNIVTQNADGESVWTYQTNATVENNAAR CEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCEECCCCCC DGFLTLLITGENTEESGFMQSQKTMTIITFKGNVVSDCKSLSTNF CCEEEEEEECCCCCCCCCEECCCEEEEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MNFNTTKIAKSILSISVIKCSRLKHFILFSEAIMKFNIICMLGLAFILSSCVSNTNPENV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GFVKTPYTSGNVSLTLKKGVTTKDQVINAFGSPNIVTQNADGESVWTYQTNATVENNAAR CEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCEECCCCCC DGFLTLLITGENTEESGFMQSQKTMTIITFKGNVVSDCKSLSTNF CCEEEEEEECCCCCCCCCEECCCEEEEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA