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The map label for this gene is yafV [H]

Identifier: 89256035

GI number: 89256035

Start: 627162

End: 627932

Strand: Reverse

Name: yafV [H]

Synonym: FTL_0644

Alternate gene names: 89256035

Gene position: 627932-627162 (Counterclockwise)

Preceding gene: 89256037

Following gene: 89256033

Centisome position: 33.12

GC content: 33.46

Gene sequence:

>771_bases
ATGTCAAAACTAAAAGTTAGTGTAATCCAATCAGATATTATCTGGGCTGATAAACAAGCCAACTATAATAATCTCGAGAA
TAGCATTGCAAATATTGACCAAGATACTGATATCATCGTAATGTGTGAGATGTTTAATACTGGTTTTATAATGAATCCAA
CTGACCAAGCAAGCACACAACAAGACATCGTTAATTGGATGTATCGCCAAGTAAAAGGCAAGAACTACGCGATAGTTGGT
AGTGCCGCTACCTATAGTGATGATAAAATTGTCAATCGCCTGTATTTTGTAACTCCTGAGAAACAGGTTTATACATACGA
TAAAAATCATCTTTTTATCCATGCTGGTGAAGACAAAAAATATACAGCGGGTAATAAACGCCAAATTATCAACTATAAAG
GTTTTAATATCCTTGTAACCGTTTGTTTTGACTTAAGGTTTCCAGTGTTTAACTGTAACAATAATGATTATGATATTCTT
ATCAATGTCGCATGCTGGCCAGAATCTCGCCGTCAACATTGGCAAGCATTACTAAAAGCTCGAGCTATAGAAAACCAAGC
TTTTGTTATAGCATGTAATCGAGTTGGTAACGATCCTAATTTTAATTATGCGGGTGATAGTATGATTATTGATTATAATG
GTGATATATTAGCTCATCAAGAATTCAAACAAGCTACTTTAAGTGCAACTTTGGATAAAGATAAACAATTACAACATCGT
AGCAAGTTTAATTTTCTTGCATCTCAAGATAAATTTACTCTTCACTTCTAA

Upstream 100 bases:

>100_bases
CAAGATAGCTTTGTAATAGCATAAATTTACTATTAAATAATTTACTAAAGCTTGCTAAACTCTCTATAAAATATAACTCT
TTTATATGAGGATAATAGCC

Downstream 100 bases:

>100_bases
TCGACTTAGCTAGATTTTGCAATACTGCATTAATAAACTTATAACCTTCTTCAGTACCCATGCTGTAACATATCTCAACA
TACTCTTTTATAATCACTTG

Product: carbon-nitrogen hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSKLKVSVIQSDIIWADKQANYNNLENSIANIDQDTDIIVMCEMFNTGFIMNPTDQASTQQDIVNWMYRQVKGKNYAIVG
SAATYSDDKIVNRLYFVTPEKQVYTYDKNHLFIHAGEDKKYTAGNKRQIINYKGFNILVTVCFDLRFPVFNCNNNDYDIL
INVACWPESRRQHWQALLKARAIENQAFVIACNRVGNDPNFNYAGDSMIIDYNGDILAHQEFKQATLSATLDKDKQLQHR
SKFNFLASQDKFTLHF

Sequences:

>Translated_256_residues
MSKLKVSVIQSDIIWADKQANYNNLENSIANIDQDTDIIVMCEMFNTGFIMNPTDQASTQQDIVNWMYRQVKGKNYAIVG
SAATYSDDKIVNRLYFVTPEKQVYTYDKNHLFIHAGEDKKYTAGNKRQIINYKGFNILVTVCFDLRFPVFNCNNNDYDIL
INVACWPESRRQHWQALLKARAIENQAFVIACNRVGNDPNFNYAGDSMIIDYNGDILAHQEFKQATLSATLDKDKQLQHR
SKFNFLASQDKFTLHF
>Mature_255_residues
SKLKVSVIQSDIIWADKQANYNNLENSIANIDQDTDIIVMCEMFNTGFIMNPTDQASTQQDIVNWMYRQVKGKNYAIVGS
AATYSDDKIVNRLYFVTPEKQVYTYDKNHLFIHAGEDKKYTAGNKRQIINYKGFNILVTVCFDLRFPVFNCNNNDYDILI
NVACWPESRRQHWQALLKARAIENQAFVIACNRVGNDPNFNYAGDSMIIDYNGDILAHQEFKQATLSATLDKDKQLQHRS
KFNFLASQDKFTLHF

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=256, Percent_Identity=43.359375, Blast_Score=215, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6323383, Length=262, Percent_Identity=24.0458015267176, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29586; Mature: 29455

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKVSVIQSDIIWADKQANYNNLENSIANIDQDTDIIVMCEMFNTGFIMNPTDQASTQ
CCCEEEEEEECCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCHH
QDIVNWMYRQVKGKNYAIVGSAATYSDDKIVNRLYFVTPEKQVYTYDKNHLFIHAGEDKK
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHEEEEEEECCCCEEEEECCCEEEEEECCCCE
YTAGNKRQIINYKGFNILVTVCFDLRFPVFNCNNNDYDILINVACWPESRRQHWQALLKA
ECCCCCEEEEEECCCEEEEEEEEECCCCEEECCCCCEEEEEEEEECCCHHHHHHHHHHHH
RAIENQAFVIACNRVGNDPNFNYAGDSMIIDYNGDILAHQEFKQATLSATLDKDKQLQHR
HHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHH
SKFNFLASQDKFTLHF
HHCCEEECCCCEEEEC
>Mature Secondary Structure 
SKLKVSVIQSDIIWADKQANYNNLENSIANIDQDTDIIVMCEMFNTGFIMNPTDQASTQ
CCEEEEEEECCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCHH
QDIVNWMYRQVKGKNYAIVGSAATYSDDKIVNRLYFVTPEKQVYTYDKNHLFIHAGEDKK
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHEEEEEEECCCCEEEEECCCEEEEEECCCCE
YTAGNKRQIINYKGFNILVTVCFDLRFPVFNCNNNDYDILINVACWPESRRQHWQALLKA
ECCCCCEEEEEECCCEEEEEEEEECCCCEEECCCCCEEEEEEEEECCCHHHHHHHHHHHH
RAIENQAFVIACNRVGNDPNFNYAGDSMIIDYNGDILAHQEFKQATLSATLDKDKQLQHR
HHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHH
SKFNFLASQDKFTLHF
HHCCEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]