Click here to switch to the map view.

The map label for this gene is ycgN [C]

Identifier: 89256031

GI number: 89256031

Start: 624980

End: 625429

Strand: Reverse

Name: ycgN [C]

Synonym: FTL_0640

Alternate gene names: 89256031

Gene position: 625429-624980 (Counterclockwise)

Preceding gene: 89256032

Following gene: 89256030

Centisome position: 32.99

GC content: 32.67

Gene sequence:

>450_bases
ATGATGAGTAAATGGTGGCAACAAATTGATTTGAAGGACATGTCTAGTGAACAATGGGAGTCAATCTGTGATAGATGTGG
GCTTTGTTGTCTAAACAAACTTCAGGATGATGAAACAGATGAGGTCTACTATACTAGAGTTAGTTGTAAGCTTCTTGATA
TTGGCAAATGCCAATGCAGCATGTATCAAAAAAGGAAACAACTTGTACCTGAATGTGTAAATCTAACTTATAAACAACTA
AAAAATCATGCTCACAAATGGTTACCTAATAGCTGTAGTTATAAACTTTTATTTGAAGGTAAAGATTTACCTGACTGGCA
TCATCTGAATACTGGCTCAACTGAAGAAATGCACAAACAAAAAAAATCAGCAAAGCATTTTGCTATTTCTGAATATGAAC
TAGATGTCGATGAATATTTAGAAGACTTTATCATAAAAATAGATAACTAA

Upstream 100 bases:

>100_bases
TAGTTAGAATGATATAATATCTTACTTTTGTACCTAGTCGACTATATTTTTCTTAAAGAATTTAGTTTAATATTTTTAAA
ATTAGAGGAAATAGACTTAA

Downstream 100 bases:

>100_bases
GTTAATATTTCTAGTATATAATTCGCTTACTCTATACTATTGGGCATAATAATGTCTGATTTAATTGCGATTAATCCTTT
CTATGAAAAAATAATTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MMSKWWQQIDLKDMSSEQWESICDRCGLCCLNKLQDDETDEVYYTRVSCKLLDIGKCQCSMYQKRKQLVPECVNLTYKQL
KNHAHKWLPNSCSYKLLFEGKDLPDWHHLNTGSTEEMHKQKKSAKHFAISEYELDVDEYLEDFIIKIDN

Sequences:

>Translated_149_residues
MMSKWWQQIDLKDMSSEQWESICDRCGLCCLNKLQDDETDEVYYTRVSCKLLDIGKCQCSMYQKRKQLVPECVNLTYKQL
KNHAHKWLPNSCSYKLLFEGKDLPDWHHLNTGSTEEMHKQKKSAKHFAISEYELDVDEYLEDFIIKIDN
>Mature_149_residues
MMSKWWQQIDLKDMSSEQWESICDRCGLCCLNKLQDDETDEVYYTRVSCKLLDIGKCQCSMYQKRKQLVPECVNLTYKQL
KNHAHKWLPNSCSYKLLFEGKDLPDWHHLNTGSTEEMHKQKKSAKHFAISEYELDVDEYLEDFIIKIDN

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=130, Percent_Identity=48.4615384615385, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 17765; Mature: 17765

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKWWQQIDLKDMSSEQWESICDRCGLCCLNKLQDDETDEVYYTRVSCKLLDIGKCQCS
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHH
MYQKRKQLVPECVNLTYKQLKNHAHKWLPNSCSYKLLFEGKDLPDWHHLNTGSTEEMHKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
KKSAKHFAISEYELDVDEYLEDFIIKIDN
HHHHHHHEHHHCCCCHHHHHHHHHEECCC
>Mature Secondary Structure
MMSKWWQQIDLKDMSSEQWESICDRCGLCCLNKLQDDETDEVYYTRVSCKLLDIGKCQCS
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHH
MYQKRKQLVPECVNLTYKQLKNHAHKWLPNSCSYKLLFEGKDLPDWHHLNTGSTEEMHKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
KKSAKHFAISEYELDVDEYLEDFIIKIDN
HHHHHHHEHHHCCCCHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA