| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256030
Identifier: 89256030
GI number: 89256030
Start: 624320
End: 624928
Strand: Reverse
Name: 89256030
Synonym: FTL_0639
Alternate gene names: NA
Gene position: 624928-624320 (Counterclockwise)
Preceding gene: 89256031
Following gene: 89256021
Centisome position: 32.96
GC content: 29.72
Gene sequence:
>609_bases ATGTCTGATTTAATTGCGATTAATCCTTTCTATGAAAAAATAATTAATGATTACCTCAATAAGGATTTTTGCATCATTGA TAACTGGCTAACAACTGATGAAACCGACAAGCTAAGACAACAGTTAGAAGAGCTTTATCAAGCAAATTATTTCAAAAAAT CTGCTGTAGGTAATCGTTTAAATGAAAATCTCGAAAGATCAATCCGCAGTGATTTTATTTTTTGGCTAGACGAAACAAAA TATGCACAAGTATTTTTTGAAAAAATAAATAGTTTTATTGAGTATATTAATAAAACTTGCTTTGCGGGAATTGTTACTAA AGAATTTCATTACGCTGTTTATCCTCAAGGATCATTTTATAAAAAGCATATTGATACATTTCAAAATGATTATCGACGTA CTATATCTATAGTTTGCTATCTCAATCAAGACTGGCAAGATTGTTTTGGTGGACAGCTAAAACTATACTTAAAAGATCAA ACGCTAGAGATATTTCCAACTGATGGTAAAATAGTTCTTTTTGATAGCAAAAGTATCGAGCATGAAGTTTTACTAGTACT TACTGAGAATAAAAGATTAAGTATTACCGGCTGGCTAAAGACTAATTGA
Upstream 100 bases:
>100_bases AGATGTCGATGAATATTTAGAAGACTTTATCATAAAAATAGATAACTAAGTTAATATTTCTAGTATATAATTCGCTTACT CTATACTATTGGGCATAATA
Downstream 100 bases:
>100_bases TTAGATAAATCACCACACCCAAGATCACTAACATAATAGCAAATATTGTCTGTAAAACTTTATCATTGAAGCTTTTTTTG ACTTTAGTTGCCAAAAGCAT
Product: oxidoreductase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxygenase; SM-20-Related Protein; SM-20-Like Protein; 2OG-Fe(II) Oxygenase Family Protein; SM-20 Domain Protein; Egl Nine-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSDLIAINPFYEKIINDYLNKDFCIIDNWLTTDETDKLRQQLEELYQANYFKKSAVGNRLNENLERSIRSDFIFWLDETK YAQVFFEKINSFIEYINKTCFAGIVTKEFHYAVYPQGSFYKKHIDTFQNDYRRTISIVCYLNQDWQDCFGGQLKLYLKDQ TLEIFPTDGKIVLFDSKSIEHEVLLVLTENKRLSITGWLKTN
Sequences:
>Translated_202_residues MSDLIAINPFYEKIINDYLNKDFCIIDNWLTTDETDKLRQQLEELYQANYFKKSAVGNRLNENLERSIRSDFIFWLDETK YAQVFFEKINSFIEYINKTCFAGIVTKEFHYAVYPQGSFYKKHIDTFQNDYRRTISIVCYLNQDWQDCFGGQLKLYLKDQ TLEIFPTDGKIVLFDSKSIEHEVLLVLTENKRLSITGWLKTN >Mature_201_residues SDLIAINPFYEKIINDYLNKDFCIIDNWLTTDETDKLRQQLEELYQANYFKKSAVGNRLNENLERSIRSDFIFWLDETKY AQVFFEKINSFIEYINKTCFAGIVTKEFHYAVYPQGSFYKKHIDTFQNDYRRTISIVCYLNQDWQDCFGGQLKLYLKDQT LEIFPTDGKIVLFDSKSIEHEVLLVLTENKRLSITGWLKTN
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24078; Mature: 23946
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLIAINPFYEKIINDYLNKDFCIIDNWLTTDETDKLRQQLEELYQANYFKKSAVGNRL CCCEEEECHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH NENLERSIRSDFIFWLDETKYAQVFFEKINSFIEYINKTCFAGIVTKEFHYAVYPQGSFY HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH KKHIDTFQNDYRRTISIVCYLNQDWQDCFGGQLKLYLKDQTLEIFPTDGKIVLFDSKSIE HHHHHHHHHHHHEEEEEEEEECCCHHHHCCCEEEEEEECCEEEEEECCCEEEEEECCCCC HEVLLVLTENKRLSITGWLKTN EEEEEEEECCCEEEEEEEEECC >Mature Secondary Structure SDLIAINPFYEKIINDYLNKDFCIIDNWLTTDETDKLRQQLEELYQANYFKKSAVGNRL CCEEEECHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH NENLERSIRSDFIFWLDETKYAQVFFEKINSFIEYINKTCFAGIVTKEFHYAVYPQGSFY HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH KKHIDTFQNDYRRTISIVCYLNQDWQDCFGGQLKLYLKDQTLEIFPTDGKIVLFDSKSIE HHHHHHHHHHHHEEEEEEEEECCCHHHHCCCEEEEEEECCEEEEEECCCEEEEEECCCCC HEVLLVLTENKRLSITGWLKTN EEEEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA