Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is cdr [H]
Identifier: 89256027
GI number: 89256027
Start: 622009
End: 622845
Strand: Direct
Name: cdr [H]
Synonym: FTL_0636
Alternate gene names: 89256027
Gene position: 622009-622845 (Clockwise)
Preceding gene: 89256026
Following gene: 89256028
Centisome position: 32.81
GC content: 34.17
Gene sequence:
>837_bases TTGGTCAAAAATGCTCTTACATCTCAGGATTTCAATTTACCTTTGGCAGGTCCAGCTAACAAACAAGGTCGTCTGATAGC AGATCATATCAATGGCTATAAGGTCGTAAATAAAGGTTATATTGGCTCATCTATCATTCAGATATTTAACTATACTGGCG CAGCAACAGGTCTAAATGAGGCTTGGATTAAATTTCATAATTTAGATATTGACTATGAAGTTGCTTATACTGCACCATTT AATAGAGTTAGTATTATGCCAAATGCAGTAAATGTTTTTACAAAGATATTGTTTGAGAAAAATATAGGTAAGCTACTAGG TGCACAAGTTATAGGCAGAGGAATCGTTGATAAAAGAGCTGATGTATTTGCTACAGCTATCAAAGCAGGAATGACGGTTG AGGATTTGCAAGATCTTGAGCTATGCTATGCGCCTCCATACTCAACTGGTAAAGACATTGTCAACCATACAGGTTATGTT GCTAATAACTTACTTAAAGGTGATTTTAAGCAAGTTGCTTTTACCAAAGTTGAAGAGTTACTGGCACAAAATGCACAAAT CATCGATGTAAGAGAAATTGGTGAAACTCGTCGAGGTATGCTAACAAATGCAAAAAATATACCATTGTCTGAAATAATAA CTAGACTAGCAGAAATTGATAAAAATCAACCTGTATATGTGCATTGTCAAACAGGACAGAGATCATATAATGTTGTGTTG ATGTTACAACAACATGGCTATGATGCATATAATATTGCAGGTGGCTATATTATGATTTCACATTATTATGATACTATTGC ACATATGACAGGCAAAAAAATTTCCTTTACTAGATAA
Upstream 100 bases:
>100_bases AAAGAAGTAGGTATTGATTTAGCAAAAACTGGTCATATTCATTGTAAATGATAACTATCAAACATCTGATGAAAATATCT ATGCCGCTGGTGATGCTATT
Downstream 100 bases:
>100_bases AGGAATGTTTTAAATAATGTGATGTTTTGCATCTAAGGAGAATTATGATTTTCAGGCAATTAATCGATAGAGATACTTAT ACTTATACTTATATTCTAGC
Product: NADH oxidase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MVKNALTSQDFNLPLAGPANKQGRLIADHINGYKVVNKGYIGSSIIQIFNYTGAATGLNEAWIKFHNLDIDYEVAYTAPF NRVSIMPNAVNVFTKILFEKNIGKLLGAQVIGRGIVDKRADVFATAIKAGMTVEDLQDLELCYAPPYSTGKDIVNHTGYV ANNLLKGDFKQVAFTKVEELLAQNAQIIDVREIGETRRGMLTNAKNIPLSEIITRLAEIDKNQPVYVHCQTGQRSYNVVL MLQQHGYDAYNIAGGYIMISHYYDTIAHMTGKKISFTR
Sequences:
>Translated_278_residues MVKNALTSQDFNLPLAGPANKQGRLIADHINGYKVVNKGYIGSSIIQIFNYTGAATGLNEAWIKFHNLDIDYEVAYTAPF NRVSIMPNAVNVFTKILFEKNIGKLLGAQVIGRGIVDKRADVFATAIKAGMTVEDLQDLELCYAPPYSTGKDIVNHTGYV ANNLLKGDFKQVAFTKVEELLAQNAQIIDVREIGETRRGMLTNAKNIPLSEIITRLAEIDKNQPVYVHCQTGQRSYNVVL MLQQHGYDAYNIAGGYIMISHYYDTIAHMTGKKISFTR >Mature_278_residues MVKNALTSQDFNLPLAGPANKQGRLIADHINGYKVVNKGYIGSSIIQIFNYTGAATGLNEAWIKFHNLDIDYEVAYTAPF NRVSIMPNAVNVFTKILFEKNIGKLLGAQVIGRGIVDKRADVFATAIKAGMTVEDLQDLELCYAPPYSTGKDIVNHTGYV ANNLLKGDFKQVAFTKVEELLAQNAQIIDVREIGETRRGMLTNAKNIPLSEIITRLAEIDKNQPVYVHCQTGQRSYNVVL MLQQHGYDAYNIAGGYIMISHYYDTIAHMTGKKISFTR
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 30897; Mature: 30897
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNALTSQDFNLPLAGPANKQGRLIADHINGYKVVNKGYIGSSIIQIFNYTGAATGLNE CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCH AWIKFHNLDIDYEVAYTAPFNRVSIMPNAVNVFTKILFEKNIGKLLGAQVIGRGIVDKRA HHEEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DVFATAIKAGMTVEDLQDLELCYAPPYSTGKDIVNHTGYVANNLLKGDFKQVAFTKVEEL HHHHHHHHHCCCHHHHHHCCEEECCCCCCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH LAQNAQIIDVREIGETRRGMLTNAKNIPLSEIITRLAEIDKNQPVYVHCQTGQRSYNVVL HHCCCEEEEHHHHCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE MLQQHGYDAYNIAGGYIMISHYYDTIAHMTGKKISFTR EEECCCCCEEEECCCEEEEEHHHHHHHHHCCCEEECCC >Mature Secondary Structure MVKNALTSQDFNLPLAGPANKQGRLIADHINGYKVVNKGYIGSSIIQIFNYTGAATGLNE CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCH AWIKFHNLDIDYEVAYTAPFNRVSIMPNAVNVFTKILFEKNIGKLLGAQVIGRGIVDKRA HHEEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DVFATAIKAGMTVEDLQDLELCYAPPYSTGKDIVNHTGYVANNLLKGDFKQVAFTKVEEL HHHHHHHHHCCCHHHHHHCCEEECCCCCCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH LAQNAQIIDVREIGETRRGMLTNAKNIPLSEIITRLAEIDKNQPVYVHCQTGQRSYNVVL HHCCCEEEEHHHHCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE MLQQHGYDAYNIAGGYIMISHYYDTIAHMTGKKISFTR EEECCCCCEEEECCCEEEEEHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA