Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is blh [H]
Identifier: 89256028
GI number: 89256028
Start: 622890
End: 623576
Strand: Direct
Name: blh [H]
Synonym: FTL_0637
Alternate gene names: 89256028
Gene position: 622890-623576 (Clockwise)
Preceding gene: 89256027
Following gene: 89256029
Centisome position: 32.85
GC content: 35.66
Gene sequence:
>687_bases ATGATTTTCAGGCAATTAATCGATAGAGATACTTATACTTATACTTATATTCTAGCTTGTGAGCAGACTAGACAAGCAGT GATAATAGATTCGGTAAGATTTAATGTTAATCAGTATCTAAAGTTACTCAAAGAACTAGATCTTAAACTGATCTACGCCA TAGACACTCATGTCCATGCTGATCATGTCACTGCAGCAGGGATTTTAAGGAAAGAAACTGGTTGTGATATCGTTATCGGT GGCGAAAGCAAAGCTGAATGTGCAACCAAAAAAGTCTTTGATGGCGATATCCTAGAGTTTGGTAACTATCAACTAAAAGC TTTGTATACCCCAGGTCATACAGATGACTCATATTGTTTCATTACTGAGAATATGCTTTTCACAGGTGATACTCTATTAA TAAGAGGATCCGGTAGAACTGACTTCCAAAATGGTGATTCATATGCAGCATATGATAGTATTATGAATAAGCTAATGACT TTGCCGGGTAGTACTATTATTTATCCTGGTCATGACTATAATGGTATAACTAGTAGTAGTGTCGCTGAAGAGAGACAAAA CAATCCAAGATTGAAGGTTAAGTCACCAGATGAATACGCTAAGTTAATGGCTGATTTAAAGTTACCACCGCCAAACTATA TAGATATCGCAGTTCCAGCAAATTTAAAATGTGGTATAGAAGAATAA
Upstream 100 bases:
>100_bases ATTATTATGATACTATTGCACATATGACAGGCAAAAAAATTTCCTTTACTAGATAAAGGAATGTTTTAAATAATGTGATG TTTTGCATCTAAGGAGAATT
Downstream 100 bases:
>100_bases AATGTTTTTGATAATTTTTGGCTTTATCTGTGGAATTGCATTAGGGTTGACAGGTGGGGGCGGCTCTATTTTGGCAGTTC CTTTGCTTACTTATGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIFRQLIDRDTYTYTYILACEQTRQAVIIDSVRFNVNQYLKLLKELDLKLIYAIDTHVHADHVTAAGILRKETGCDIVIG GESKAECATKKVFDGDILEFGNYQLKALYTPGHTDDSYCFITENMLFTGDTLLIRGSGRTDFQNGDSYAAYDSIMNKLMT LPGSTIIYPGHDYNGITSSSVAEERQNNPRLKVKSPDEYAKLMADLKLPPPNYIDIAVPANLKCGIEE
Sequences:
>Translated_228_residues MIFRQLIDRDTYTYTYILACEQTRQAVIIDSVRFNVNQYLKLLKELDLKLIYAIDTHVHADHVTAAGILRKETGCDIVIG GESKAECATKKVFDGDILEFGNYQLKALYTPGHTDDSYCFITENMLFTGDTLLIRGSGRTDFQNGDSYAAYDSIMNKLMT LPGSTIIYPGHDYNGITSSSVAEERQNNPRLKVKSPDEYAKLMADLKLPPPNYIDIAVPANLKCGIEE >Mature_228_residues MIFRQLIDRDTYTYTYILACEQTRQAVIIDSVRFNVNQYLKLLKELDLKLIYAIDTHVHADHVTAAGILRKETGCDIVIG GESKAECATKKVFDGDILEFGNYQLKALYTPGHTDDSYCFITENMLFTGDTLLIRGSGRTDFQNGDSYAAYDSIMNKLMT LPGSTIIYPGHDYNGITSSSVAEERQNNPRLKVKSPDEYAKLMADLKLPPPNYIDIAVPANLKCGIEE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=230, Percent_Identity=46.0869565217391, Blast_Score=211, Evalue=3e-55, Organism=Homo sapiens, GI94538320, Length=171, Percent_Identity=28.6549707602339, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI94538322, Length=172, Percent_Identity=28.4883720930233, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1787158, Length=206, Percent_Identity=31.5533980582524, Blast_Score=83, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538952, Length=227, Percent_Identity=44.4933920704846, Blast_Score=191, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536925, Length=244, Percent_Identity=27.8688524590164, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324614, Length=175, Percent_Identity=33.7142857142857, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI221330176, Length=228, Percent_Identity=46.9298245614035, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24667703, Length=169, Percent_Identity=33.1360946745562, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24667711, Length=169, Percent_Identity=33.1360946745562, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI21356335, Length=169, Percent_Identity=33.1360946745562, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 25566; Mature: 25566
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRQLIDRDTYTYTYILACEQTRQAVIIDSVRFNVNQYLKLLKELDLKLIYAIDTHVHA CHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHCCEEEEEEEECCCCC DHVTAAGILRKETGCDIVIGGESKAECATKKVFDGDILEFGNYQLKALYTPGHTDDSYCF CHHHHHHHEECCCCCEEEECCCCCHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCEEE ITENMLFTGDTLLIRGSGRTDFQNGDSYAAYDSIMNKLMTLPGSTIIYPGHDYNGITSSS EECCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH VAEERQNNPRLKVKSPDEYAKLMADLKLPPPNYIDIAVPANLKCGIEE HHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MIFRQLIDRDTYTYTYILACEQTRQAVIIDSVRFNVNQYLKLLKELDLKLIYAIDTHVHA CHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHCCEEEEEEEECCCCC DHVTAAGILRKETGCDIVIGGESKAECATKKVFDGDILEFGNYQLKALYTPGHTDDSYCF CHHHHHHHEECCCCCEEEECCCCCHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCEEE ITENMLFTGDTLLIRGSGRTDFQNGDSYAAYDSIMNKLMTLPGSTIIYPGHDYNGITSSS EECCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH VAEERQNNPRLKVKSPDEYAKLMADLKLPPPNYIDIAVPANLKCGIEE HHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]