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The map label for this gene is lpsE [H]

Identifier: 89255993

GI number: 89255993

Start: 581370

End: 582461

Strand: Direct

Name: lpsE [H]

Synonym: FTL_0595

Alternate gene names: 89255993

Gene position: 581370-582461 (Clockwise)

Preceding gene: 89255992

Following gene: 89255994

Centisome position: 30.66

GC content: 28.75

Gene sequence:

>1092_bases
ATGAGAAGTAAGTTATTATTCATAGCTAATGATTTTGATATTGTAATATATCGTTTCAGAAGAGAAGTAATCGAGTCTTT
TGCTGCTAAAGAGTATGAGATAGTACTAGTAACACCATATTCTAAGAAAGCAGAGGTTTTTTGTAAAAGTCTTGGTGTTA
AGTATATAAATGTTGATATAGATAGAAGAGGCAAAAATCCTTTTAAGGATTTGCTTCTTTTATTTAACTATTTCAAAATA
ATAAAAAAAGAAAAACCTGATTACATTTTTAGCTATACAATTAAACCAAATTTGTATGTTGGGTTAGTGAATTTGTTTTT
TAGGAAGAAGTTTTATCCAAATGTAACAGGCTTAGGAAGTGTTTTTGCTAATCATGGTATTGTTCAGAAGTTTATAATAT
CTTTATATAAGTTATCATTTAAAAGCACCACAAAAGTATTCTTTCAGAATGAGCAAAATAAAAAGTTATTTATAGCTAAG
AAAATAATCAGTGGAGAAAAATCAATATTATTACCAGGTTCTGGGGTAAACTTAGATGAAAATAAATATGTTGACTATCC
TAAAGACCAAGGAATATTAAAATTCGTTTTTCTTGGCCGAATAATGAAAGAAAAGGGGATTTATGAATTGTTAGAAGCCT
TTGCTATACTTGAGAAAAAATATAAAAATATTAGTCTTGATATTTATGGTTTTTGTGATGAAAATAAATCTAATTTTATG
GGAAAGGTTAATACGATAAAATCAGTAAAATTTTATGGTTTTACTGATAATACTAAAGAAAAAATAGCTAGTGCACATGC
AGTTGTTTTGCCATCTTACCATGAAGGAATGTCAAATGTGCTGTTAGAAGCAGCTGCGATAGGTAGACCTGTAATTGCGT
CAGATATTCCTGGGTGTAGAGAAATTTTTGATGATGGTCTCTCTGGCTTATCATGTAACCCTAATGATGTGAGTTCTTTA
CGTAACTCATTAGAGCAGTTTATAAATATGTCGTATACTGATAAAATAGCTATGAGCTATAAAGCTAGAGCTAAGATAGA
AAAAGATTTTGATAGAAGTATTGTTGTCAATGCATACTTACAGCAAAATTAA

Upstream 100 bases:

>100_bases
TTAGGTAAGAGAACTTATCTGACAAAAATTTTTAATCCAATTATAAGATTGCTTGCTAAAAAAGTAGATTTTATTAATAA
AGTTTTTGGGAATTTGACTT

Downstream 100 bases:

>100_bases
TAATAAGGGTTTAAATTATGAGTTTATATGAGGATATAGTCGCTAAAAGAGAAAAGGTTTCATTGGTTGGCTTGGGTTAT
GTTGGTTTACCAATAGCTAT

Product: galacturonosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRSKLLFIANDFDIVIYRFRREVIESFAAKEYEIVLVTPYSKKAEVFCKSLGVKYINVDIDRRGKNPFKDLLLLFNYFKI
IKKEKPDYIFSYTIKPNLYVGLVNLFFRKKFYPNVTGLGSVFANHGIVQKFIISLYKLSFKSTTKVFFQNEQNKKLFIAK
KIISGEKSILLPGSGVNLDENKYVDYPKDQGILKFVFLGRIMKEKGIYELLEAFAILEKKYKNISLDIYGFCDENKSNFM
GKVNTIKSVKFYGFTDNTKEKIASAHAVVLPSYHEGMSNVLLEAAAIGRPVIASDIPGCREIFDDGLSGLSCNPNDVSSL
RNSLEQFINMSYTDKIAMSYKARAKIEKDFDRSIVVNAYLQQN

Sequences:

>Translated_363_residues
MRSKLLFIANDFDIVIYRFRREVIESFAAKEYEIVLVTPYSKKAEVFCKSLGVKYINVDIDRRGKNPFKDLLLLFNYFKI
IKKEKPDYIFSYTIKPNLYVGLVNLFFRKKFYPNVTGLGSVFANHGIVQKFIISLYKLSFKSTTKVFFQNEQNKKLFIAK
KIISGEKSILLPGSGVNLDENKYVDYPKDQGILKFVFLGRIMKEKGIYELLEAFAILEKKYKNISLDIYGFCDENKSNFM
GKVNTIKSVKFYGFTDNTKEKIASAHAVVLPSYHEGMSNVLLEAAAIGRPVIASDIPGCREIFDDGLSGLSCNPNDVSSL
RNSLEQFINMSYTDKIAMSYKARAKIEKDFDRSIVVNAYLQQN
>Mature_363_residues
MRSKLLFIANDFDIVIYRFRREVIESFAAKEYEIVLVTPYSKKAEVFCKSLGVKYINVDIDRRGKNPFKDLLLLFNYFKI
IKKEKPDYIFSYTIKPNLYVGLVNLFFRKKFYPNVTGLGSVFANHGIVQKFIISLYKLSFKSTTKVFFQNEQNKKLFIAK
KIISGEKSILLPGSGVNLDENKYVDYPKDQGILKFVFLGRIMKEKGIYELLEAFAILEKKYKNISLDIYGFCDENKSNFM
GKVNTIKSVKFYGFTDNTKEKIASAHAVVLPSYHEGMSNVLLEAAAIGRPVIASDIPGCREIFDDGLSGLSCNPNDVSSL
RNSLEQFINMSYTDKIAMSYKARAKIEKDFDRSIVVNAYLQQN

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41600; Mature: 41600

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKLLFIANDFDIVIYRFRREVIESFAAKEYEIVLVTPYSKKAEVFCKSLGVKYINVDI
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEE
DRRGKNPFKDLLLLFNYFKIIKKEKPDYIFSYTIKPNLYVGLVNLFFRKKFYPNVTGLGS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHH
VFANHGIVQKFIISLYKLSFKSTTKVFFQNEQNKKLFIAKKIISGEKSILLPGSGVNLDE
HHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCCC
NKYVDYPKDQGILKFVFLGRIMKEKGIYELLEAFAILEKKYKNISLDIYGFCDENKSNFM
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
GKVNTIKSVKFYGFTDNTKEKIASAHAVVLPSYHEGMSNVLLEAAAIGRPVIASDIPGCR
CCCEEEEEEEEEECCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCHHH
EIFDDGLSGLSCNPNDVSSLRNSLEQFINMSYTDKIAMSYKARAKIEKDFDRSIVVNAYL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
QQN
CCC
>Mature Secondary Structure
MRSKLLFIANDFDIVIYRFRREVIESFAAKEYEIVLVTPYSKKAEVFCKSLGVKYINVDI
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEE
DRRGKNPFKDLLLLFNYFKIIKKEKPDYIFSYTIKPNLYVGLVNLFFRKKFYPNVTGLGS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHH
VFANHGIVQKFIISLYKLSFKSTTKVFFQNEQNKKLFIAKKIISGEKSILLPGSGVNLDE
HHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCCC
NKYVDYPKDQGILKFVFLGRIMKEKGIYELLEAFAILEKKYKNISLDIYGFCDENKSNFM
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
GKVNTIKSVKFYGFTDNTKEKIASAHAVVLPSYHEGMSNVLLEAAAIGRPVIASDIPGCR
CCCEEEEEEEEEECCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCHHH
EIFDDGLSGLSCNPNDVSSLRNSLEQFINMSYTDKIAMSYKARAKIEKDFDRSIVVNAYL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
QQN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]