| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is fabZ [H]
Identifier: 89255945
GI number: 89255945
Start: 521733
End: 522224
Strand: Direct
Name: fabZ [H]
Synonym: FTL_0538
Alternate gene names: 89255945
Gene position: 521733-522224 (Clockwise)
Preceding gene: 89255944
Following gene: 89255946
Centisome position: 27.52
GC content: 37.6
Gene sequence:
>492_bases ATGAGCCAGTTTAATCAAAATAATAAACAGATAGATGTAATGGGGATTAGAAAAATCTTACCTCACAGGTATCCTTTTGC ACTTTTGGATAAGATCGTTGATTGGAGTGTTGAAGATAGAACGATTGTTGCACAAAAAAATGTCACTATAAATGAAGATT TTTTCAATGGACATTTTCCTGATTTCCCAGTTATGCCTGGTGTACTGATAGTTGAAGCGATGGCTCAAGCAACGGCAATA CTTGGTGAACTAATGGCAGAGACATTGTTCGCACATGTTGTTGAGAAAGCTGGTGGTGGTAGAAGAACATTCATGCTAGC TGGTATTGATAAGGTAAGGGTCAAAAGACCTGTAGTACCAGGAGATGTGTTAGTAATTGAGTCGCGTATGGTAAAACAAA AAAATATTATCTGTACAGCAGAGTCAGTCGCAAAGGTTGATGGACAAATTGTTTGTTCAGCTGAATTAATGGCAGCATAT AAGGACTACTAA
Upstream 100 bases:
>100_bases TTCAATGGGGTAGGTTCGTAGCTAAATTAGCTAAGATTGATACTCTAATTACAAAAGTAAAGCAACTAGAAGAAAAAATT AAATAAGTAAGGATTGTTTA
Downstream 100 bases:
>100_bases TCGTGATACATAGTTTGGCAGTAGTACATGAGAGCGCCAAAATAGCCGATAGTGCTATAATAGGGCCATTCTGTGTTATT GGGAAGAATGTTGTTATTGG
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAI LGELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAY KDY
Sequences:
>Translated_163_residues MSQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAI LGELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAY KDY >Mature_162_residues SQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAIL GELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAYK DY
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=155, Percent_Identity=43.8709677419355, Blast_Score=130, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 18151; Mature: 18019
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFP CCCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCCC DFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCC GDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAYKDY CCEEEEHHHHHHHCCEEEEHHHHHHCCCEEEEHHHHHHHHCCC >Mature Secondary Structure SQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFP CCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCCC DFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCC GDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAYKDY CCEEEEHHHHHHHCCEEEEHHHHHHCCCEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA