Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255868
Identifier: 89255868
GI number: 89255868
Start: 432804
End: 433133
Strand: Reverse
Name: 89255868
Synonym: FTL_0458
Alternate gene names: NA
Gene position: 433133-432804 (Counterclockwise)
Preceding gene: 89255874
Following gene: 89255867
Centisome position: 22.84
GC content: 30.3
Gene sequence:
>330_bases ATGCAAATAAAACAAGCTCAACAAACTATTACCGAACTTTTTAAAGATATAATCCACCCAAGACTTGCTAGCTTTATTGC TTTATCAGAAGAAGTTGGGGAATTAGCAAACGAAATAATGAAGAAAGAAATCTACGAAGAAACTAATGATAATCAAAAAA TTAAAGCAGAACTTACAGATGTATTTGTAAGCTTACTTGAACTAGCAAATGTCTATAACATAGATTTAGAAACTGAGTTT ATAGAAAAAATCCAAACTCTAGAACCTCGAGTACAACAATGGAATAAAGCCAAAGCCTTACTTAAAGCTAAAAGGACTAA GTTAGATTAA
Upstream 100 bases:
>100_bases CTAATCATACATTATAAACCATCAGTTTATGAATATATAGATCTTACAAAAGGATGTTAAAATTATTGCAAATTAAGATA AAACTAACTGATTAAATAGT
Downstream 100 bases:
>100_bases ACCTAAAGCTAATCTAGCAACAATTCTAGATAACTTTGAATATTTTGCAGTTACATATATCTTTTAGTAATATTTTATAC TACAATTTAGTTTTGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQIKQAQQTITELFKDIIHPRLASFIALSEEVGELANEIMKKEIYEETNDNQKIKAELTDVFVSLLELANVYNIDLETEF IEKIQTLEPRVQQWNKAKALLKAKRTKLD
Sequences:
>Translated_109_residues MQIKQAQQTITELFKDIIHPRLASFIALSEEVGELANEIMKKEIYEETNDNQKIKAELTDVFVSLLELANVYNIDLETEF IEKIQTLEPRVQQWNKAKALLKAKRTKLD >Mature_109_residues MQIKQAQQTITELFKDIIHPRLASFIALSEEVGELANEIMKKEIYEETNDNQKIKAELTDVFVSLLELANVYNIDLETEF IEKIQTLEPRVQQWNKAKALLKAKRTKLD
Specific function: Unknown
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12690; Mature: 12690
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKQAQQTITELFKDIIHPRLASFIALSEEVGELANEIMKKEIYEETNDNQKIKAELTD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFVSLLELANVYNIDLETEFIEKIQTLEPRVQQWNKAKALLKAKRTKLD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIKQAQQTITELFKDIIHPRLASFIALSEEVGELANEIMKKEIYEETNDNQKIKAELTD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFVSLLELANVYNIDLETEFIEKIQTLEPRVQQWNKAKALLKAKRTKLD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA