Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is engA [H]
Identifier: 89255825
GI number: 89255825
Start: 382052
End: 383449
Strand: Reverse
Name: engA [H]
Synonym: FTL_0414
Alternate gene names: 89255825
Gene position: 383449-382052 (Counterclockwise)
Preceding gene: 89255826
Following gene: 89255824
Centisome position: 20.22
GC content: 35.48
Gene sequence:
>1398_bases ATGTCTTTTTTAGTTGCAATTGTAGGTAGAGCCAATGTTGGTAAATCTACTCTTTTTAATGTTTTGACAAATTCGCACGA TGCCTTAGTATTTGATTTTGAGGGTGTAACTCGTGATCGTCAATACGGACAAGCAAAGTATGATGATTTAGATTATCTAG TAGTTGATACTGGAGGTATTTCAGATAAAGATGTGGGTTTTGATGAGTTTATGGCTAAACAATCACAGATTGCTATAGAT GAGGCGAATTTAGTTTTCTTTGTAGTTGATGGCAGATCTGGATTGACAACCGGAGATGAGTACGTTGCTAGCCTTTTACG CCAGAAAGATAAGAAAGTAGTAGTTGTGGTAAATAAGGTTGATGGTACCGATGAAGAAGCTGCAATGGCTGAATTTTATA GTTTTGGTTTTGATAAGGTATTTGCAATATCTGCAGCACATCGTAGAAACACGCAAAAGCTAGTTGATAAGTTTCTAAAA AAACCATTAAATGAATACTATCAAGATTATACTCAAACACAAGAGCATAAAGAACAACAGCGCCATGGTATCCATTTTTC ATTAATTGGTAGACCTAACGTTGGTAAATCGACACTTACAAATAGAATGCTTGGCGAAGATAGGGTTGTGGTATTTGACA TGCCAGGCACTACAATTGATAGTGTCAGTATCCCATTTGAACGCCATGGTCAGAAGTATACTATAGTTGATACAGCTGGT GTGCGCAAAAGAGGTAAGGTAAAACAAACTTTGGAAAAGTTTTCGGTAATAAAAACATTACAAGCAATACAAGATTCAAA TGTAGTAGTTGCAGTAGTTGATGCAAGACAAGGTATCTCAGATCAAGACCTGAGTCTGATACATTTTGCTATTAAAAATG GTAGAGCATTGGTCTTAGCTGTAAATAAATGGGATGGTATGACAGAAGAAGATCGTATTCAGGTTAAGCAAGATCTTAAA AGAAAGCTTTTTTTCCTGCAAGATTATGTCGATATACATTTTATCTCAGCATTATATGGTACTAATGTTGGGCATGTTTT TGAGTCAATTGATACTGCATATGCATGTGCAAATAAAAAAATAACTACAGCTGATGCTACACGTCTAATGCAGCTTGCGG TAGAGGCACACTCACCGCCAATGGTAGGTAAATTTAGAATTAAGCTTAAGTACGCTCATGTTGGAGGACATAATCCTCCT GTTATTGTAATACATGGTAATCAAGTAAGTAGACTGCCAAACTCATATAAAAGATATTTAGAAAATTTCTTTAGAGAAGC CTTAGATTTTCGTGGTACGCCAATAGTATTTGAGTTTAAGCAGTCAGAAAACCCTTTTGCAGATAGAAAAAATAAGAGAT CAAAAGATGAAGGCAGTAAGAGTAAAAAAGTTAAGTAA
Upstream 100 bases:
>100_bases TTACAAATTAATTTTTACTTTAAGTGATTTGCTTTATAAAAATTCTGAAATAGAGTAAGATTATCGATAAATATATAAAT TATAAAATTATTGAGTAAAG
Downstream 100 bases:
>100_bases GCTTGCTGATGAGATAACTATTAACATTAGTGGTGCAAAAAATGCTTTGTTACATCTAATTTTTGCAAGCTTAATTCCGG ATACTAAAACAAAATTTACT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGISDKDVGFDEFMAKQSQIAID EANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNKVDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLK KPLNEYYQDYTQTQEHKEQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVDTAG VRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRALVLAVNKWDGMTEEDRIQVKQDLK RKLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACANKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPP VIVIHGNQVSRLPNSYKRYLENFFREALDFRGTPIVFEFKQSENPFADRKNKRSKDEGSKSKKVK
Sequences:
>Translated_465_residues MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGISDKDVGFDEFMAKQSQIAID EANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNKVDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLK KPLNEYYQDYTQTQEHKEQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVDTAG VRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRALVLAVNKWDGMTEEDRIQVKQDLK RKLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACANKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPP VIVIHGNQVSRLPNSYKRYLENFFREALDFRGTPIVFEFKQSENPFADRKNKRSKDEGSKSKKVK >Mature_464_residues SFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGISDKDVGFDEFMAKQSQIAIDE ANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNKVDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLKK PLNEYYQDYTQTQEHKEQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVDTAGV RKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRALVLAVNKWDGMTEEDRIQVKQDLKR KLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACANKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPV IVIHGNQVSRLPNSYKRYLENFFREALDFRGTPIVFEFKQSENPFADRKNKRSKDEGSKSKKVK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=483, Percent_Identity=49.6894409937888, Blast_Score=500, Evalue=1e-143, Organism=Escherichia coli, GI1788919, Length=247, Percent_Identity=28.3400809716599, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507259, Length=161, Percent_Identity=31.055900621118, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=158, Percent_Identity=29.746835443038, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52469; Mature: 52338
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI CCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEECCCC SDKDVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNKV CCCCCCHHHHHHCCHHEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECC DGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLKKPLNEYYQDYTQTQEHKEQQ CCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVDTAG HCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHCCCEEEEEECCC VRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRALVLA CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEE VNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACANKK EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE ITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYKRYL EEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCHHHHCHHHHHHHH ENFFREALDFRGTPIVFEFKQSENPFADRKNKRSKDEGSKSKKVK HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI CEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEECCCC SDKDVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNKV CCCCCCHHHHHHCCHHEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECC DGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLKKPLNEYYQDYTQTQEHKEQQ CCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVDTAG HCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHCCCEEEEEECCC VRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRALVLA CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEE VNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACANKK EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE ITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYKRYL EEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCHHHHCHHHHHHHH ENFFREALDFRGTPIVFEFKQSENPFADRKNKRSKDEGSKSKKVK HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA