Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255826
Identifier: 89255826
GI number: 89255826
Start: 383686
End: 384204
Strand: Reverse
Name: 89255826
Synonym: FTL_0415
Alternate gene names: NA
Gene position: 384204-383686 (Counterclockwise)
Preceding gene: 89255829
Following gene: 89255825
Centisome position: 20.26
GC content: 36.03
Gene sequence:
>519_bases ATGTTTGCTGTTACTTCAAATATGTATGCAACACAGGTTAGCGCTCAATTAAAAATCCAGAATAATTCTAATGCTATGAT GCATGTTGAAATGTCTAAAGAGCTTAGTTCTAAAGCAACATTTGAGGGAAATACTGTTTATGATATTCAACCAGGTAAAG TACAAAAAGTTATTGTTTTGATAGATTATGGAGCTACTGGCGATGTTCAAGTTAAAGTTGATGCTCAGTGTAAGTTTAAT GCGAGTATTGGTGCAGTAGTATGGGAACTTATAAGTTCTGGAGGCAAACATCTTGCTAATTTTAAAACGGAGGTGGGTTG TAATTTTGCAGCTAATGCAAGCGCTTTTGCGACTCTAGGTATATCTCAGTTAACATCGCTAGTAGCTAATGTATCTTTCA CAAAGAGCGATGGATTACATGAATGTAGTTTGAGTGAAGGTTACATAAACATTTATCCTAGATCATCAAATCAAGTGGGT ATAGATTACCACATACCAGACACATTAGGGGGGGCTTAG
Upstream 100 bases:
>100_bases AACCATTGATATTTATTGCTTTTCAAATCTTAAATAACAGCAGTTTAGCTATTTTCAATATAATTTAAGTTTTTTGTGCA CAGAACCTAGTTTATTTGGT
Downstream 100 bases:
>100_bases TATGGATGCCAAACAAGTGAAGATAATTCATTAGTTGTTGATAAAGATATTCTAACTCCAACTTATGTTAAGCTTATCTC CCCATCTTCAAAGATTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MFAVTSNMYATQVSAQLKIQNNSNAMMHVEMSKELSSKATFEGNTVYDIQPGKVQKVIVLIDYGATGDVQVKVDAQCKFN ASIGAVVWELISSGGKHLANFKTEVGCNFAANASAFATLGISQLTSLVANVSFTKSDGLHECSLSEGYINIYPRSSNQVG IDYHIPDTLGGA
Sequences:
>Translated_172_residues MFAVTSNMYATQVSAQLKIQNNSNAMMHVEMSKELSSKATFEGNTVYDIQPGKVQKVIVLIDYGATGDVQVKVDAQCKFN ASIGAVVWELISSGGKHLANFKTEVGCNFAANASAFATLGISQLTSLVANVSFTKSDGLHECSLSEGYINIYPRSSNQVG IDYHIPDTLGGA >Mature_172_residues MFAVTSNMYATQVSAQLKIQNNSNAMMHVEMSKELSSKATFEGNTVYDIQPGKVQKVIVLIDYGATGDVQVKVDAQCKFN ASIGAVVWELISSGGKHLANFKTEVGCNFAANASAFATLGISQLTSLVANVSFTKSDGLHECSLSEGYINIYPRSSNQVG IDYHIPDTLGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18350; Mature: 18350
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVTSNMYATQVSAQLKIQNNSNAMMHVEMSKELSSKATFEGNTVYDIQPGKVQKVIVL CEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEECCCEEEEECCCCEEEEEEE IDYGATGDVQVKVDAQCKFNASIGAVVWELISSGGKHLANFKTEVGCNFAANASAFATLG EECCCCCCEEEEEECCEEECCCHHHHHHHHHHCCCCEEECCCHHCCCCEECCCCHHEECC ISQLTSLVANVSFTKSDGLHECSLSEGYINIYPRSSNQVGIDYHIPDTLGGA HHHHHHHHHCCEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCHHCCCC >Mature Secondary Structure MFAVTSNMYATQVSAQLKIQNNSNAMMHVEMSKELSSKATFEGNTVYDIQPGKVQKVIVL CEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEECCCEEEEECCCCEEEEEEE IDYGATGDVQVKVDAQCKFNASIGAVVWELISSGGKHLANFKTEVGCNFAANASAFATLG EECCCCCCEEEEEECCEEECCCHHHHHHHHHHCCCCEEECCCHHCCCCEECCCCHHEECC ISQLTSLVANVSFTKSDGLHECSLSEGYINIYPRSSNQVGIDYHIPDTLGGA HHHHHHHHHCCEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA