Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054853
Identifier: 89054853
GI number: 89054853
Start: 2366990
End: 2367766
Strand: Reverse
Name: 89054853
Synonym: Jann_2362
Alternate gene names: NA
Gene position: 2367766-2366990 (Counterclockwise)
Preceding gene: 89054854
Following gene: 89054852
Centisome position: 54.84
GC content: 60.62
Gene sequence:
>777_bases ATGATCCACGACGCCCTCCATACCGCCCATGGCACGTGCCAAGGCGACGCGGTGCTTGCGCGATTGCTGAGCGCGGACGT GGAGGATTTGGCGTCCGTGCAGGTCACCGACTGCGCAATTGACGACAGAACTGTGCGCTTCGCCACCCAGATGGCACGCG ATCCGATCCAGCGCAGCCACCGCAAGGGCGCGTTTTACGAGCCTGAGGAACTGGCGCTGATGCGGGAGTTTCTGCCGGAC GGGGGGACCTTTTTGGATATCGGGGCCAATGTCGGCAATCACAGCCTCTATGCCGGCCTCTTCTGCGCGGCCCGTCGGAT TATTCCGTTTGAACCCAATCCTTTGGCCTATCGGTTACTGATCCTGAACATGGTCATGAACGATCTGCACGCGCGCACGG TTTTCGACTATGTCGGGTTTGGCGCATCGGATGTGGACCGCGAAGGATTCGCGATGTCCGAGCGGCGCAAAAACCTGGGC GCGGCCCGGATGATGGCGGGCGCAGGCGATATCGCCACGCTCCGGCCGGATGATTTCCTGCACGATGAGACCCCTGATTT CATCAAGATCGATGTCGAAGGGATGGAAATGCAGGTGCTGCGTGGCCTGCAAAAGACCATCAAACGCACCCGGCCCGTTT TGCTGGTGGAGGTGGACCGTGCCAACATCCACGACTTTGCCGATTGGCGGCTGGCCCATGGTTTCGCGCTGCCGACCTCG ATCAAGCATTATGCGGACAACCGCAACTTCCTGTGTGTGCCGGAGGAGCGGATGTGA
Upstream 100 bases:
>100_bases AGGATCGCGGTGTTTTGACCGAGGCCGCAATCCGTACCTATGTCGCCCGGATGCCGTATCAGCGCGATCCCCAACCTCGT CTGGTGGAAAGCGTCGGCCA
Downstream 100 bases:
>100_bases CCGAGCCCATTCGCCTCTACTATTGGCCCGCGCCGAATTTCGGCGATGCGTTGAGCCATCTGGTGGTCGAGCATGTTTCG GGCCGCCCGGTCGTGAATGC
Product: methyltransferase FkbM
Products: NA
Alternate protein names: FkbM Family Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase FkbM Family; Methyltransferase; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIHDALHTAHGTCQGDAVLARLLSADVEDLASVQVTDCAIDDRTVRFATQMARDPIQRSHRKGAFYEPEELALMREFLPD GGTFLDIGANVGNHSLYAGLFCAARRIIPFEPNPLAYRLLILNMVMNDLHARTVFDYVGFGASDVDREGFAMSERRKNLG AARMMAGAGDIATLRPDDFLHDETPDFIKIDVEGMEMQVLRGLQKTIKRTRPVLLVEVDRANIHDFADWRLAHGFALPTS IKHYADNRNFLCVPEERM
Sequences:
>Translated_258_residues MIHDALHTAHGTCQGDAVLARLLSADVEDLASVQVTDCAIDDRTVRFATQMARDPIQRSHRKGAFYEPEELALMREFLPD GGTFLDIGANVGNHSLYAGLFCAARRIIPFEPNPLAYRLLILNMVMNDLHARTVFDYVGFGASDVDREGFAMSERRKNLG AARMMAGAGDIATLRPDDFLHDETPDFIKIDVEGMEMQVLRGLQKTIKRTRPVLLVEVDRANIHDFADWRLAHGFALPTS IKHYADNRNFLCVPEERM >Mature_258_residues MIHDALHTAHGTCQGDAVLARLLSADVEDLASVQVTDCAIDDRTVRFATQMARDPIQRSHRKGAFYEPEELALMREFLPD GGTFLDIGANVGNHSLYAGLFCAARRIIPFEPNPLAYRLLILNMVMNDLHARTVFDYVGFGASDVDREGFAMSERRKNLG AARMMAGAGDIATLRPDDFLHDETPDFIKIDVEGMEMQVLRGLQKTIKRTRPVLLVEVDRANIHDFADWRLAHGFALPTS IKHYADNRNFLCVPEERM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28956; Mature: 28956
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHDALHTAHGTCQGDAVLARLLSADVEDLASVQVTDCAIDDRTVRFATQMARDPIQRSH CCCCHHHHHCCCCCHHHHHHHHHHHCHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHH RKGAFYEPEELALMREFLPDGGTFLDIGANVGNHSLYAGLFCAARRIIPFEPNPLAYRLL CCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH ILNMVMNDLHARTVFDYVGFGASDVDREGFAMSERRKNLGAARMMAGAGDIATLRPDDFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCEEEECCCCCC HDETPDFIKIDVEGMEMQVLRGLQKTIKRTRPVLLVEVDRANIHDFADWRLAHGFALPTS CCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCEECCHH IKHYADNRNFLCVPEERM HHHHCCCCCEEECCCCCC >Mature Secondary Structure MIHDALHTAHGTCQGDAVLARLLSADVEDLASVQVTDCAIDDRTVRFATQMARDPIQRSH CCCCHHHHHCCCCCHHHHHHHHHHHCHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHH RKGAFYEPEELALMREFLPDGGTFLDIGANVGNHSLYAGLFCAARRIIPFEPNPLAYRLL CCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH ILNMVMNDLHARTVFDYVGFGASDVDREGFAMSERRKNLGAARMMAGAGDIATLRPDDFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCEEEECCCCCC HDETPDFIKIDVEGMEMQVLRGLQKTIKRTRPVLLVEVDRANIHDFADWRLAHGFALPTS CCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCEECCHH IKHYADNRNFLCVPEERM HHHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA