Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054852
Identifier: 89054852
GI number: 89054852
Start: 2366193
End: 2366993
Strand: Reverse
Name: 89054852
Synonym: Jann_2361
Alternate gene names: NA
Gene position: 2366993-2366193 (Counterclockwise)
Preceding gene: 89054853
Following gene: 89054851
Centisome position: 54.82
GC content: 64.79
Gene sequence:
>801_bases GTGACCGAGCCCATTCGCCTCTACTATTGGCCCGCGCCGAATTTCGGCGATGCGTTGAGCCATCTGGTGGTCGAGCATGT TTCGGGCCGCCCGGTCGTGAATGCGCGGCCCAAACAGGCAGAGCTGTTTGCGCTTGGCTCCCTGATGCATGTGATCTCCA GGCATTGGACGGAAAGGGTCCGGGGCGAGGGGCCGCTATTATGGGGGACGGGGCTTCTGAACCCGTTCTATCGCAAGGAG TTTTTGGAGAATGTCCGCGTGCGCCTGCTGCGCGGTCCCATTTCAGCGGCGTTTCTGCGGCTGAAAATGACAGAATTCGG TGATCCGGGGTTGTTGGCGGATGAGGCGGTCGGGCCCGTGGAAGACCGCCACGACCGCGTCGCCATCGTGCCCCATCACA GCCAGATGGACGATCCGCGTTTTGTGGAGATGGTGGAGGCCGACCCGGCCCTGCACCTGATCGACGTGCGGCTGGACCCC GTCACCGTCTGCCGCGAAATCGCCGCCTCGGCCCATGTGTTTTCCGCCAGCCTGCACGGGCTGATCGTGGCGGATGCCTA CGGCGTCGCCAATACCTGGATGGACCCCGAAGCGCAGGGGCGATTGAAATACCACGACTACGCCGCCGCCATCGGACGTG ACATGATTGCGCCGGTTGAGATTCGCGATGTGCCAAAGGCCGCCCGCACGGCGCGCGACCGGCCCTTTCCCTACGCTGAC GGCATCGCGCGCTGCCGCGAGAGCCTGCACCGTCACTTTCCAGCCGAACTGCGCGCGCCCCTGCGTGCGACAGCGTCCTG A
Upstream 100 bases:
>100_bases ACTTTGCCGATTGGCGGCTGGCCCATGGTTTCGCGCTGCCGACCTCGATCAAGCATTATGCGGACAACCGCAACTTCCTG TGTGTGCCGGAGGAGCGGAT
Downstream 100 bases:
>100_bases GGCCGCGATAGATATGGCAAAGACCTACAACCCCGCCCATGCCGATATCTCGCCCGCCGCGCGTCTTGCAGCGTTAGGGG CCGGTGAAGCCGTTGACCTG
Product: exoV domain-containing protein
Products: NA
Alternate protein names: ExoV Domain-Containing Protein; Pyruvyltransferase; ExoV Domain Protein; GumL Protein; Xanthan Biosynthesis Pyruvyltransferase GumL; Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTEPIRLYYWPAPNFGDALSHLVVEHVSGRPVVNARPKQAELFALGSLMHVISRHWTERVRGEGPLLWGTGLLNPFYRKE FLENVRVRLLRGPISAAFLRLKMTEFGDPGLLADEAVGPVEDRHDRVAIVPHHSQMDDPRFVEMVEADPALHLIDVRLDP VTVCREIAASAHVFSASLHGLIVADAYGVANTWMDPEAQGRLKYHDYAAAIGRDMIAPVEIRDVPKAARTARDRPFPYAD GIARCRESLHRHFPAELRAPLRATAS
Sequences:
>Translated_266_residues MTEPIRLYYWPAPNFGDALSHLVVEHVSGRPVVNARPKQAELFALGSLMHVISRHWTERVRGEGPLLWGTGLLNPFYRKE FLENVRVRLLRGPISAAFLRLKMTEFGDPGLLADEAVGPVEDRHDRVAIVPHHSQMDDPRFVEMVEADPALHLIDVRLDP VTVCREIAASAHVFSASLHGLIVADAYGVANTWMDPEAQGRLKYHDYAAAIGRDMIAPVEIRDVPKAARTARDRPFPYAD GIARCRESLHRHFPAELRAPLRATAS >Mature_265_residues TEPIRLYYWPAPNFGDALSHLVVEHVSGRPVVNARPKQAELFALGSLMHVISRHWTERVRGEGPLLWGTGLLNPFYRKEF LENVRVRLLRGPISAAFLRLKMTEFGDPGLLADEAVGPVEDRHDRVAIVPHHSQMDDPRFVEMVEADPALHLIDVRLDPV TVCREIAASAHVFSASLHGLIVADAYGVANTWMDPEAQGRLKYHDYAAAIGRDMIAPVEIRDVPKAARTARDRPFPYADG IARCRESLHRHFPAELRAPLRATAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29781; Mature: 29649
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPIRLYYWPAPNFGDALSHLVVEHVSGRPVVNARPKQAELFALGSLMHVISRHWTERV CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RGEGPLLWGTGLLNPFYRKEFLENVRVRLLRGPISAAFLRLKMTEFGDPGLLADEAVGPV CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC EDRHDRVAIVPHHSQMDDPRFVEMVEADPALHLIDVRLDPVTVCREIAASAHVFSASLHG CCCCCEEEEEECCCCCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCE LIVADAYGVANTWMDPEAQGRLKYHDYAAAIGRDMIAPVEIRDVPKAARTARDRPFPYAD EEEEECCCCHHCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCHH GIARCRESLHRHFPAELRAPLRATAS HHHHHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure TEPIRLYYWPAPNFGDALSHLVVEHVSGRPVVNARPKQAELFALGSLMHVISRHWTERV CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RGEGPLLWGTGLLNPFYRKEFLENVRVRLLRGPISAAFLRLKMTEFGDPGLLADEAVGPV CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC EDRHDRVAIVPHHSQMDDPRFVEMVEADPALHLIDVRLDPVTVCREIAASAHVFSASLHG CCCCCEEEEEECCCCCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCE LIVADAYGVANTWMDPEAQGRLKYHDYAAAIGRDMIAPVEIRDVPKAARTARDRPFPYAD EEEEECCCCHHCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCHH GIARCRESLHRHFPAELRAPLRATAS HHHHHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA