| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is livG [H]
Identifier: 89054655
GI number: 89054655
Start: 2170329
End: 2171120
Strand: Reverse
Name: livG [H]
Synonym: Jann_2164
Alternate gene names: 89054655
Gene position: 2171120-2170329 (Counterclockwise)
Preceding gene: 89054656
Following gene: 89054654
Centisome position: 50.28
GC content: 60.86
Gene sequence:
>792_bases ATGATTGAAGTTCACGACCTCCACAAACACTTCGGTGGCTTCCATGCCGTAGATGGCGCGAGCCTTCGGATCGAAACGGG CTCGATCACCGGGCTGATCGGCCCCAATGGCGCGGGCAAGACGACGCTCTTCAACGTGATCGCGGGCGTCCTGCCGCCCA CATCCGGCAAGGTTGTGATGGACGGCGAGGATATCACCGGCCTGCCGCCCCATCAGCTGTTCGGCAAGGGCCTGCTGCGC ACCTTCCAGATCGCCCATGAATTCTCCTCCATGACCTGTCGGGAAAATCTGATGATGGTGCCCGAGGGGCAATCCGGTGA GACTCTGTGGAACACGTGGTTTGGCCGCAAACGCATCGCCGACGAGGAACGCGCGCTAAAGGCCAAAGCCGATGAAGTGC TGGAGTTTCTGACCGTCGAACATCTGGCCGATCAACCTGCGGGCCAGATCTCGGGCGGGCAAAAGAAGCTGCTGGAACTG GGCCGCACGATGATGGTCGACGCCAAGATCGTGTTTCTGGACGAGGTCGGCGCAGGCGTGAACCGCACGCTCCTCAACAC CATCGGTGACGCGATCATCCGCCTCAACAAGGAACGCGGCTACACGTTCTGCGTGATTGAGCATGACATGGATTTCATCG GCCGCCTCTGCGACCCCGTGATCTGTATGGCCGAGGGCCACGTGCTGGCGGAAGGAACGCTCGACCAGATCAAGGCCAAC GACGCGGTGATCGAGGCCTATCTGGGCACCGGCCTCAAGAACAAGGATCAGTTGGAAGAGGCCCCGGCATGA
Upstream 100 bases:
>100_bases ATTGACCTCCCATTGAGAGAGGCGCAGCCCGGTTTCATCGCCGGGCTGCGTCTTTTTACACAGGCGCGCGCGCCGGGATT GTCGGCCCAGAGGGACGCCC
Downstream 100 bases:
>100_bases GCGACAACGCCTATCACAACGACCGGGGCAACAAGGACCGCTCGATCACGAAGCCCCGTCCCCCCTCCATGGGCGATCCG ATTGCGCCGGGCGGCAAGGC
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIEVHDLHKHFGGFHAVDGASLRIETGSITGLIGPNGAGKTTLFNVIAGVLPPTSGKVVMDGEDITGLPPHQLFGKGLLR TFQIAHEFSSMTCRENLMMVPEGQSGETLWNTWFGRKRIADEERALKAKADEVLEFLTVEHLADQPAGQISGGQKKLLEL GRTMMVDAKIVFLDEVGAGVNRTLLNTIGDAIIRLNKERGYTFCVIEHDMDFIGRLCDPVICMAEGHVLAEGTLDQIKAN DAVIEAYLGTGLKNKDQLEEAPA
Sequences:
>Translated_263_residues MIEVHDLHKHFGGFHAVDGASLRIETGSITGLIGPNGAGKTTLFNVIAGVLPPTSGKVVMDGEDITGLPPHQLFGKGLLR TFQIAHEFSSMTCRENLMMVPEGQSGETLWNTWFGRKRIADEERALKAKADEVLEFLTVEHLADQPAGQISGGQKKLLEL GRTMMVDAKIVFLDEVGAGVNRTLLNTIGDAIIRLNKERGYTFCVIEHDMDFIGRLCDPVICMAEGHVLAEGTLDQIKAN DAVIEAYLGTGLKNKDQLEEAPA >Mature_263_residues MIEVHDLHKHFGGFHAVDGASLRIETGSITGLIGPNGAGKTTLFNVIAGVLPPTSGKVVMDGEDITGLPPHQLFGKGLLR TFQIAHEFSSMTCRENLMMVPEGQSGETLWNTWFGRKRIADEERALKAKADEVLEFLTVEHLADQPAGQISGGQKKLLEL GRTMMVDAKIVFLDEVGAGVNRTLLNTIGDAIIRLNKERGYTFCVIEHDMDFIGRLCDPVICMAEGHVLAEGTLDQIKAN DAVIEAYLGTGLKNKDQLEEAPA
Specific function: Probable component of a branched-chain amino-acid transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=232, Percent_Identity=29.3103448275862, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI150417984, Length=233, Percent_Identity=27.4678111587983, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI156105685, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI45446740, Length=252, Percent_Identity=28.1746031746032, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI47078218, Length=252, Percent_Identity=28.1746031746032, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI21536376, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27881501, Length=226, Percent_Identity=27.4336283185841, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI30795238, Length=226, Percent_Identity=27.4336283185841, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI116734710, Length=218, Percent_Identity=26.605504587156, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI31657092, Length=254, Percent_Identity=25.5905511811024, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27477115, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI153792144, Length=184, Percent_Identity=25.5434782608696, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI171184400, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=33.3333333333333, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1789593, Length=248, Percent_Identity=30.241935483871, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082268, Length=250, Percent_Identity=31.6, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788761, Length=240, Percent_Identity=29.5833333333333, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=28.3261802575107, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI87081791, Length=237, Percent_Identity=25.7383966244726, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787370, Length=237, Percent_Identity=24.4725738396624, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1790739, Length=246, Percent_Identity=28.4552845528455, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=27.4193548387097, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1786803, Length=238, Percent_Identity=27.7310924369748, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1790190, Length=265, Percent_Identity=25.2830188679245, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87081782, Length=247, Percent_Identity=30.3643724696356, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786398, Length=243, Percent_Identity=27.1604938271605, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789032, Length=243, Percent_Identity=28.8065843621399, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788450, Length=251, Percent_Identity=27.4900398406374, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786345, Length=217, Percent_Identity=26.7281105990783, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790544, Length=251, Percent_Identity=26.2948207171315, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786253, Length=231, Percent_Identity=26.8398268398268, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788472, Length=258, Percent_Identity=25.1937984496124, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789672, Length=244, Percent_Identity=25.8196721311475, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1789962, Length=252, Percent_Identity=25.7936507936508, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=25.1082251082251, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=25.7261410788382, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786703, Length=237, Percent_Identity=27.4261603375527, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=26.8085106382979, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=24.7826086956522, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=24.4239631336406, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787500, Length=255, Percent_Identity=23.1372549019608, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI48994943, Length=276, Percent_Identity=25.3623188405797, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=239, Percent_Identity=24.6861924686192, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787758, Length=250, Percent_Identity=23.2, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786319, Length=239, Percent_Identity=25.9414225941423, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=24.8945147679325, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788225, Length=240, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787547, Length=249, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787792, Length=239, Percent_Identity=23.0125523012552, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789891, Length=230, Percent_Identity=25.2173913043478, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=24.0174672489083, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=24.0566037735849, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787105, Length=236, Percent_Identity=24.1525423728814, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994997, Length=240, Percent_Identity=24.1666666666667, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48995001, Length=226, Percent_Identity=22.1238938053097, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=24.8908296943231, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788644, Length=266, Percent_Identity=24.812030075188, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787112, Length=227, Percent_Identity=24.6696035242291, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788897, Length=260, Percent_Identity=23.8461538461538, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786981, Length=216, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787972, Length=248, Percent_Identity=25.4032258064516, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1788506, Length=230, Percent_Identity=24.3478260869565, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI145693107, Length=222, Percent_Identity=22.972972972973, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787164, Length=232, Percent_Identity=24.5689655172414, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=26.6949152542373, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=26.6949152542373, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=26.6949152542373, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17510237, Length=240, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI115533608, Length=236, Percent_Identity=29.2372881355932, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17543740, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17565938, Length=231, Percent_Identity=26.4069264069264, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17565586, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115534520, Length=249, Percent_Identity=24.8995983935743, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992285, Length=235, Percent_Identity=23.4042553191489, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193208177, Length=233, Percent_Identity=23.175965665236, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512771, Length=240, Percent_Identity=29.5833333333333, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI116007184, Length=238, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221500365, Length=238, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574150, Length=234, Percent_Identity=28.2051282051282, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007328, Length=234, Percent_Identity=28.2051282051282, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641565, Length=227, Percent_Identity=22.4669603524229, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28578; Mature: 28578
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVHDLHKHFGGFHAVDGASLRIETGSITGLIGPNGAGKTTLFNVIAGVLPPTSGKVVM CCCHHHHHHHCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEE DGEDITGLPPHQLFGKGLLRTFQIAHEFSSMTCRENLMMVPEGQSGETLWNTWFGRKRIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCHHHCC DEERALKAKADEVLEFLTVEHLADQPAGQISGGQKKLLELGRTMMVDAKIVFLDEVGAGV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCH NRTLLNTIGDAIIRLNKERGYTFCVIEHDMDFIGRLCDPVICMAEGHVLAEGTLDQIKAN HHHHHHHHHHHHEEEECCCCCEEEEEECCHHHHHHHHCCEEEEECCCEEECCCHHHHHCC DAVIEAYLGTGLKNKDQLEEAPA HHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure MIEVHDLHKHFGGFHAVDGASLRIETGSITGLIGPNGAGKTTLFNVIAGVLPPTSGKVVM CCCHHHHHHHCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEE DGEDITGLPPHQLFGKGLLRTFQIAHEFSSMTCRENLMMVPEGQSGETLWNTWFGRKRIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCHHHCC DEERALKAKADEVLEFLTVEHLADQPAGQISGGQKKLLELGRTMMVDAKIVFLDEVGAGV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCH NRTLLNTIGDAIIRLNKERGYTFCVIEHDMDFIGRLCDPVICMAEGHVLAEGTLDQIKAN HHHHHHHHHHHHEEEECCCCCEEEEEECCHHHHHHHHCCEEEEECCCEEECCCHHHHHCC DAVIEAYLGTGLKNKDQLEEAPA HHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]