Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is livK [C]
Identifier: 89054656
GI number: 89054656
Start: 2171220
End: 2172419
Strand: Reverse
Name: livK [C]
Synonym: Jann_2165
Alternate gene names: 89054656
Gene position: 2172419-2171220 (Counterclockwise)
Preceding gene: 89054662
Following gene: 89054655
Centisome position: 50.31
GC content: 65.42
Gene sequence:
>1200_bases ATGATGAAAAAGTTTTTGCTGGCATCCGCCGCTTCCATTGCGCTGACAGGCGCTGCCGCCGCCGATGGCCACCAGGGCGA TGTGACGCTTGGCGTGATCCTCGGCTTCACCGGTCCGATTGAATCGATCACACCCGCCATGGGCGACGGCGCAGAGCTGG CGATGGCCGAAGTCACCGACAGCGGTATGTTGTTTGGCGGCGCGGCCGTTACGTCTGTTCGGGCTGACTCGACCTGCGTT GACAGTTCCGCCGCACAAGCGGCCGCCGAGCGTCTGATCACGTCCGATGGCGTGCACGGCATTGTCGGCGCCGATTGCTC CGGCGTCACCGGCTCCATTCTGGCCAACGTCGCCGTGCCCAACGGCATGGTGATGATCTCGCCGTCCGCCACCTCCCCCG GCCTGTCGACGGCAGAGGATAACGGGTTGTTCTTCCGCACCGCGCCGTCCGATGCGCGCCAGGGCGTCGTGATGGCCGAA ATCATCATGGAACGCGGCATCGACACCGTCGCGCTGACCTACACCAACAACGACTATGGCCAGGGCCTGGCCGATGCCTT CTCTGCGGCGTTTGAAGAAGCGGGCGGCACCGTCACGCTGTCGGCGGCCCATGAGGATGGCCGCGCGGATTACTCCGCCG AAGTCGGCGCACTTGCCTCCGCCGGTGGTGACGCGCTTGTCGTTGCGGGCTACGTGGACCAGGGCGGCTCCGGCGTGATC CAGGCTGCATTAGATACCGGCGCGTTTGACACCTTCGTGTTCCCCGACGGCATGGTCTCTCAGGCGCTGGTCGACAATTT CGGCTCCGACATCGACGGGTCGTTCGGCCAGAACCCCGGCACCGACAGCGAAGGCGCGGGCCTCTATCAGGCCATGGCCG AGGAAGCGGGCTTTGACGGCACCTCGCCGTTCTCCGCGGAATCCTATGACGCCGCCGCCCTGCTCATGCTCGCCATGGCC GCTGCGGAAAGCCGCAACGCCGCCGACTATATGGGTGAGATCATGAACGTCGCCAACGCGCCCGGCACCGAGATCCTGCC CGGCCAGCTTGGCATGGCGCTGGAAATGATCGCCAACGGGGAAGAGGTCGATTATGTCGGCGCCTCCGCCGTGGAGCTGA TCGGGGGTGGCGAATCTGCCGGCAATTATCGTGAGATCGAGATCTCCGGCGGGGAGCTGACGGTCGCCGGTTACCGCTGA
Upstream 100 bases:
>100_bases AAACGAAACGCCCTTTCCCTTTGCAGAACACACGGCTAATCTTGCGCGCATCAAGGACGATCAAATGTGAAATTTGGCAA TGTCCACACCAGGGAGATAC
Downstream 100 bases:
>100_bases TTGACCTCCCATTGAGAGAGGCGCAGCCCGGTTTCATCGCCGGGCTGCGTCTTTTTACACAGGCGCGCGCGCCGGGATTG TCGGCCCAGAGGGACGCCCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MMKKFLLASAASIALTGAAAADGHQGDVTLGVILGFTGPIESITPAMGDGAELAMAEVTDSGMLFGGAAVTSVRADSTCV DSSAAQAAAERLITSDGVHGIVGADCSGVTGSILANVAVPNGMVMISPSATSPGLSTAEDNGLFFRTAPSDARQGVVMAE IIMERGIDTVALTYTNNDYGQGLADAFSAAFEEAGGTVTLSAAHEDGRADYSAEVGALASAGGDALVVAGYVDQGGSGVI QAALDTGAFDTFVFPDGMVSQALVDNFGSDIDGSFGQNPGTDSEGAGLYQAMAEEAGFDGTSPFSAESYDAAALLMLAMA AAESRNAADYMGEIMNVANAPGTEILPGQLGMALEMIANGEEVDYVGASAVELIGGGESAGNYREIEISGGELTVAGYR
Sequences:
>Translated_399_residues MMKKFLLASAASIALTGAAAADGHQGDVTLGVILGFTGPIESITPAMGDGAELAMAEVTDSGMLFGGAAVTSVRADSTCV DSSAAQAAAERLITSDGVHGIVGADCSGVTGSILANVAVPNGMVMISPSATSPGLSTAEDNGLFFRTAPSDARQGVVMAE IIMERGIDTVALTYTNNDYGQGLADAFSAAFEEAGGTVTLSAAHEDGRADYSAEVGALASAGGDALVVAGYVDQGGSGVI QAALDTGAFDTFVFPDGMVSQALVDNFGSDIDGSFGQNPGTDSEGAGLYQAMAEEAGFDGTSPFSAESYDAAALLMLAMA AAESRNAADYMGEIMNVANAPGTEILPGQLGMALEMIANGEEVDYVGASAVELIGGGESAGNYREIEISGGELTVAGYR >Mature_399_residues MMKKFLLASAASIALTGAAAADGHQGDVTLGVILGFTGPIESITPAMGDGAELAMAEVTDSGMLFGGAAVTSVRADSTCV DSSAAQAAAERLITSDGVHGIVGADCSGVTGSILANVAVPNGMVMISPSATSPGLSTAEDNGLFFRTAPSDARQGVVMAE IIMERGIDTVALTYTNNDYGQGLADAFSAAFEEAGGTVTLSAAHEDGRADYSAEVGALASAGGDALVVAGYVDQGGSGVI QAALDTGAFDTFVFPDGMVSQALVDNFGSDIDGSFGQNPGTDSEGAGLYQAMAEEAGFDGTSPFSAESYDAAALLMLAMA AAESRNAADYMGEIMNVANAPGTEILPGQLGMALEMIANGEEVDYVGASAVELIGGGESAGNYREIEISGGELTVAGYR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=277, Percent_Identity=27.4368231046931, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789867, Length=320, Percent_Identity=26.25, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39810; Mature: 39810
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKFLLASAASIALTGAAAADGHQGDVTLGVILGFTGPIESITPAMGDGAELAMAEVTD CCHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCCCEEEEEEECC SGMLFGGAAVTSVRADSTCVDSSAAQAAAERLITSDGVHGIVGADCSGVTGSILANVAVP CCEEECCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHEEEECC NGMVMISPSATSPGLSTAEDNGLFFRTAPSDARQGVVMAEIIMERGIDTVALTYTNNDYG CCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCEEEEEEECCCCC QGLADAFSAAFEEAGGTVTLSAAHEDGRADYSAEVGALASAGGDALVVAGYVDQGGSGVI CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCEE QAALDTGAFDTFVFPDGMVSQALVDNFGSDIDGSFGQNPGTDSEGAGLYQAMAEEAGFDG EEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC TSPFSAESYDAAALLMLAMAAAESRNAADYMGEIMNVANAPGTEILPGQLGMALEMIANG CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC EEVDYVGASAVELIGGGESAGNYREIEISGGELTVAGYR CCEEECCCCCEEEECCCCCCCCEEEEEEECCEEEEECCC >Mature Secondary Structure MMKKFLLASAASIALTGAAAADGHQGDVTLGVILGFTGPIESITPAMGDGAELAMAEVTD CCHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCCCEEEEEEECC SGMLFGGAAVTSVRADSTCVDSSAAQAAAERLITSDGVHGIVGADCSGVTGSILANVAVP CCEEECCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHEEEECC NGMVMISPSATSPGLSTAEDNGLFFRTAPSDARQGVVMAEIIMERGIDTVALTYTNNDYG CCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCEEEEEEECCCCC QGLADAFSAAFEEAGGTVTLSAAHEDGRADYSAEVGALASAGGDALVVAGYVDQGGSGVI CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCEE QAALDTGAFDTFVFPDGMVSQALVDNFGSDIDGSFGQNPGTDSEGAGLYQAMAEEAGFDG EEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC TSPFSAESYDAAALLMLAMAAAESRNAADYMGEIMNVANAPGTEILPGQLGMALEMIANG CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC EEVDYVGASAVELIGGGESAGNYREIEISGGELTVAGYR CCEEECCCCCEEEECCCCCCCCEEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA