Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054653
Identifier: 89054653
GI number: 89054653
Start: 2169080
End: 2169496
Strand: Reverse
Name: 89054653
Synonym: Jann_2162
Alternate gene names: NA
Gene position: 2169496-2169080 (Counterclockwise)
Preceding gene: 89054654
Following gene: 89054652
Centisome position: 50.24
GC content: 68.82
Gene sequence:
>417_bases ATGCGGGGTCCTGGCACGGTGCTGGCGGCCTCTCTCGCGGCCTTCCCCGCGACCGCAACGCTGGATGACAGCCCGCAGGT CAGCTATCGCGGCCTGTGCCAGATGGCGGAGGTCTGCACGCCAGACGGCACCTGCGGCACGACGCCCGCCCTGGGGGATC TGTTGGTGGTGATAGAGCCGGACGGCACCTGGATGGGCCAGAACGAGGCCGACCTGTCGTCCATCGACCATTACCCGACG CTGGACGACGCCTTGCCCCTGCCGCGCCTCGACACAAGCCGCCGGTCATTTCTGACCGATCTGCCGCCCGAGGACGCTGC CCGCCGTTTCGCGCTCAGGGTCCAGACCCCGCGCCCTGAGACGCGTGAGCCTGTCCTGCGCGGCCAGTATTTCGTCATAA GGTGCCTGGCGCAGTGA
Upstream 100 bases:
>100_bases GCTATGTTCTGGTGCAGGGACGCAATGCGTTCACGGGCACCGGCAAGGAGCTTCTCGCTGACCCGGAGGTCCGCAAGAGC TTTCTGGGGGGCTGATGCGG
Downstream 100 bases:
>100_bases GGGCGCTGGTCTGCCTCCTCGCGCTGGTCCCCGGCCCGGCCCTGGCGGTTGGCCTGGAATGCACATTCACGACAATCTGC AGCCCGCTGACCGATTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRGPGTVLAASLAAFPATATLDDSPQVSYRGLCQMAEVCTPDGTCGTTPALGDLLVVIEPDGTWMGQNEADLSSIDHYPT LDDALPLPRLDTSRRSFLTDLPPEDAARRFALRVQTPRPETREPVLRGQYFVIRCLAQ
Sequences:
>Translated_138_residues MRGPGTVLAASLAAFPATATLDDSPQVSYRGLCQMAEVCTPDGTCGTTPALGDLLVVIEPDGTWMGQNEADLSSIDHYPT LDDALPLPRLDTSRRSFLTDLPPEDAARRFALRVQTPRPETREPVLRGQYFVIRCLAQ >Mature_138_residues MRGPGTVLAASLAAFPATATLDDSPQVSYRGLCQMAEVCTPDGTCGTTPALGDLLVVIEPDGTWMGQNEADLSSIDHYPT LDDALPLPRLDTSRRSFLTDLPPEDAARRFALRVQTPRPETREPVLRGQYFVIRCLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14987; Mature: 14987
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPGTVLAASLAAFPATATLDDSPQVSYRGLCQMAEVCTPDGTCGTTPALGDLLVVIEP CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC DGTWMGQNEADLSSIDHYPTLDDALPLPRLDTSRRSFLTDLPPEDAARRFALRVQTPRPE CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHEEEEEECCCCCC TREPVLRGQYFVIRCLAQ CCCCHHCCCEEEEEEECC >Mature Secondary Structure MRGPGTVLAASLAAFPATATLDDSPQVSYRGLCQMAEVCTPDGTCGTTPALGDLLVVIEP CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC DGTWMGQNEADLSSIDHYPTLDDALPLPRLDTSRRSFLTDLPPEDAARRFALRVQTPRPE CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHEEEEEECCCCCC TREPVLRGQYFVIRCLAQ CCCCHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA