Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054652
Identifier: 89054652
GI number: 89054652
Start: 2168718
End: 2169083
Strand: Reverse
Name: 89054652
Synonym: Jann_2161
Alternate gene names: NA
Gene position: 2169083-2168718 (Counterclockwise)
Preceding gene: 89054653
Following gene: 89054651
Centisome position: 50.23
GC content: 66.94
Gene sequence:
>366_bases GTGAGGGCGCTGGTCTGCCTCCTCGCGCTGGTCCCCGGCCCGGCCCTGGCGGTTGGCCTGGAATGCACATTCACGACAAT CTGCAGCCCGCTGACCGATTGCCAGACCCATCCCGGCGTGCCGTTCCGCTTTGACGTCGTCTCGGGCGCTTTCACGTTCT TTGCGGAGGACCGGCCCGTCTTTGGCACGCGATTGACCCATCTGACACCGCCCGCCTATGGCGCGATCTTCCAGACCTCC CCGGACAGCACGATCCTGCTGACCGTCACCGGCACGGGCGACGCGGTGATGACGCAACAGGACCTGACGTCCGGGGGCGG GGTGCGCTCAATCTCCTACTTCGGCATCTGCGAGCCGGGCGCATGA
Upstream 100 bases:
>100_bases ACGCTGCCCGCCGTTTCGCGCTCAGGGTCCAGACCCCGCGCCCTGAGACGCGTGAGCCTGTCCTGCGCGGCCAGTATTTC GTCATAAGGTGCCTGGCGCA
Downstream 100 bases:
>100_bases GGGGGCGGGCCGGACGCGTGTCGAGATCAGGACCCGGTGCGATAGAGCGCAATGGGCCCGCTTTTAGTGAAGGAGATCGC CCATGATGCGGCTTGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRALVCLLALVPGPALAVGLECTFTTICSPLTDCQTHPGVPFRFDVVSGAFTFFAEDRPVFGTRLTHLTPPAYGAIFQTS PDSTILLTVTGTGDAVMTQQDLTSGGGVRSISYFGICEPGA
Sequences:
>Translated_121_residues MRALVCLLALVPGPALAVGLECTFTTICSPLTDCQTHPGVPFRFDVVSGAFTFFAEDRPVFGTRLTHLTPPAYGAIFQTS PDSTILLTVTGTGDAVMTQQDLTSGGGVRSISYFGICEPGA >Mature_121_residues MRALVCLLALVPGPALAVGLECTFTTICSPLTDCQTHPGVPFRFDVVSGAFTFFAEDRPVFGTRLTHLTPPAYGAIFQTS PDSTILLTVTGTGDAVMTQQDLTSGGGVRSISYFGICEPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12659; Mature: 12659
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVCLLALVPGPALAVGLECTFTTICSPLTDCQTHPGVPFRFDVVSGAFTFFAEDRPV CHHHHEEHHHCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC FGTRLTHLTPPAYGAIFQTSPDSTILLTVTGTGDAVMTQQDLTSGGGVRSISYFGICEPG CCEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEEECCC A C >Mature Secondary Structure MRALVCLLALVPGPALAVGLECTFTTICSPLTDCQTHPGVPFRFDVVSGAFTFFAEDRPV CHHHHEEHHHCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC FGTRLTHLTPPAYGAIFQTSPDSTILLTVTGTGDAVMTQQDLTSGGGVRSISYFGICEPG CCEEEEEECCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEEECCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA