The gene/protein map for NC_007802 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054650

Identifier: 89054650

GI number: 89054650

Start: 2167815

End: 2168234

Strand: Reverse

Name: 89054650

Synonym: Jann_2159

Alternate gene names: NA

Gene position: 2168234-2167815 (Counterclockwise)

Preceding gene: 89054651

Following gene: 89054649

Centisome position: 50.21

GC content: 66.9

Gene sequence:

>420_bases
ATGAACCGGGCGCTGAGCACGGGGACGCGGCGACCAAGGCGCCTTCGGCGCGCGCCCCTCCTCGCTCTGCTCCTCGCAGC
GGCCCCATTGGCGGCCCCCGTGGCAGTCATCGCAGAGCCATGGGCCTGCCGGATGACGGTGCAATGCGAGAATTACGATT
GCTTTGCCATCGACGATCTTTACGAGGTCATCGCCGCCGATCACGCGGGCGATCTGTTTTTGACCTCGCCCGCAGGCGAC
CGTCCGGTCACGCGGTTGCGGGACCAGGGCAGTCTGCCCGCCGCCTATGCCACCGCCGGGTCCCACGCCATCGGAGAGCT
TTTGACCATCACCGCGGACGGCCAGGCGATCATGTCGATCCACGGCTCGGACGGACCGGCCCGGACGATCACCGTTTTCG
GCACCTGCACACTCATTTAG

Upstream 100 bases:

>100_bases
TCATCACCTTTGACAGCGTGGGCCGCGTGGCGGTCACCGGGCATCAACCGCAGGCCGGCACGCGGGTGGTCACGGGGATT
GGCTCTTGCGAGATCCCGGA

Downstream 100 bases:

>100_bases
GCCCTTCTTTATCTGGCCATTTCCGTGCCCGCGCGCTACCAGAGACCAAAGCAAGCCTCACCATAAGGGGCTGCGACCAA
CCGGGAGACGACGCGTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNRALSTGTRRPRRLRRAPLLALLLAAAPLAAPVAVIAEPWACRMTVQCENYDCFAIDDLYEVIAADHAGDLFLTSPAGD
RPVTRLRDQGSLPAAYATAGSHAIGELLTITADGQAIMSIHGSDGPARTITVFGTCTLI

Sequences:

>Translated_139_residues
MNRALSTGTRRPRRLRRAPLLALLLAAAPLAAPVAVIAEPWACRMTVQCENYDCFAIDDLYEVIAADHAGDLFLTSPAGD
RPVTRLRDQGSLPAAYATAGSHAIGELLTITADGQAIMSIHGSDGPARTITVFGTCTLI
>Mature_139_residues
MNRALSTGTRRPRRLRRAPLLALLLAAAPLAAPVAVIAEPWACRMTVQCENYDCFAIDDLYEVIAADHAGDLFLTSPAGD
RPVTRLRDQGSLPAAYATAGSHAIGELLTITADGQAIMSIHGSDGPARTITVFGTCTLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14702; Mature: 14702

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRALSTGTRRPRRLRRAPLLALLLAAAPLAAPVAVIAEPWACRMTVQCENYDCFAIDDL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHCCCCCEEEEEEEECCCCEEEHHHH
YEVIAADHAGDLFLTSPAGDRPVTRLRDQGSLPAAYATAGSHAIGELLTITADGQAIMSI
HHHHHCCCCCCEEEECCCCCCCHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEE
HGSDGPARTITVFGTCTLI
ECCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MNRALSTGTRRPRRLRRAPLLALLLAAAPLAAPVAVIAEPWACRMTVQCENYDCFAIDDL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHCCCCCEEEEEEEECCCCEEEHHHH
YEVIAADHAGDLFLTSPAGDRPVTRLRDQGSLPAAYATAGSHAIGELLTITADGQAIMSI
HHHHHCCCCCCEEEECCCCCCCHHHHCCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEE
HGSDGPARTITVFGTCTLI
ECCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA