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The map label for this gene is ycjP [C]

Identifier: 89054607

GI number: 89054607

Start: 2124470

End: 2125390

Strand: Reverse

Name: ycjP [C]

Synonym: Jann_2116

Alternate gene names: 89054607

Gene position: 2125390-2124470 (Counterclockwise)

Preceding gene: 89054608

Following gene: 89054602

Centisome position: 49.22

GC content: 59.28

Gene sequence:

>921_bases
ATGAGCCAGACGCAAATCTTCCACGATCACGAGGCCGATCTTGGCCACAAGGTGAAGTGGTATGCCAAGCGCGTCACCGT
TTACGGCATTTTGTTGCTGTGGGCCTTCATCTGCCTGTTCCCGATCTACTGGACGATCACGACGTCGTTCAAACTGGCCC
CGGACGTCATGCAGGGCAACATGATCCCGTTTGTGGATTACACGCCGCAATGGCGCGGGTGGCGGTCCCTTGGCATGTCG
CCCGACACGATCGGGGAGTACTCCACCGTCCGGGCCGAGTTTGTGAAACGGTTTCTGAATTCCACAATCGTGGCGCTGTC
GGCCTCCACGTTGGCGGTGCTTTTGGGCAGCCTGGCCGCCTACGGCCTCAGCCGGTTCGAGTACCGGTTCGGCTTCATGC
GCAACGACGACATCAGCTTCTTCTTCCTCAGCCAGCTCATCCTGCCGCCCGTGGTCCTCGCCCTGCCCTTTTTGGTGCTT
TACCGGGAAATCGACATGCTCGACAGCCGCATCGGGCTGATCCTGCTCTACACGCTCACCGTGTTGCCGATTGTCATCTG
GATCATGCGGGACCAGTTCAGTTCGATCCCGATAGAGCTTGAGGAAGCCGCGCTGGTCGATGGCCTGTCAATCTGGGGCG
CGTTCCTTACAATCATCGTCCCCATCGCGCTGCCGGGAATGGTTGCGGCCTTTATCCTCAGCCTCGTGCTGACGTGGAAC
GAGTATTTCTTTGCAGCCCTTCTGACATCAACGGATGCCACAACACTGCCCGTCATGGTCGCCAGCCAAACCGGCAGTCA
GGGGATCAACTGGTGGTCCATGGCCGCGCTGTCGACAGCCGCGATCCTGCCGCTGATCGTCATCGGCATCGTGTTGGAAC
GCTACATCATCAAAGGCATGGCCGCGGGCGCGGTGAAATAA

Upstream 100 bases:

>100_bases
ACGATGCTCGCCATGGTCTATCTGGTGTTCATCGTCATCGGCTTCACCCTGTTCCTGAAACTCGCGGCCCGCTGGATGCG
GCCGAAATACTGAGGGTGCC

Downstream 100 bases:

>100_bases
AGCGGAACGTTCATTCTGAGCCCGATCTTGCGTCCTTTCGCACTGCGGCGACTGACAGCTGCCGCGCGCGGTGCAAAAAC
AAATGATAGAACCGTTAGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSQTQIFHDHEADLGHKVKWYAKRVTVYGILLLWAFICLFPIYWTITTSFKLAPDVMQGNMIPFVDYTPQWRGWRSLGMS
PDTIGEYSTVRAEFVKRFLNSTIVALSASTLAVLLGSLAAYGLSRFEYRFGFMRNDDISFFFLSQLILPPVVLALPFLVL
YREIDMLDSRIGLILLYTLTVLPIVIWIMRDQFSSIPIELEEAALVDGLSIWGAFLTIIVPIALPGMVAAFILSLVLTWN
EYFFAALLTSTDATTLPVMVASQTGSQGINWWSMAALSTAAILPLIVIGIVLERYIIKGMAAGAVK

Sequences:

>Translated_306_residues
MSQTQIFHDHEADLGHKVKWYAKRVTVYGILLLWAFICLFPIYWTITTSFKLAPDVMQGNMIPFVDYTPQWRGWRSLGMS
PDTIGEYSTVRAEFVKRFLNSTIVALSASTLAVLLGSLAAYGLSRFEYRFGFMRNDDISFFFLSQLILPPVVLALPFLVL
YREIDMLDSRIGLILLYTLTVLPIVIWIMRDQFSSIPIELEEAALVDGLSIWGAFLTIIVPIALPGMVAAFILSLVLTWN
EYFFAALLTSTDATTLPVMVASQTGSQGINWWSMAALSTAAILPLIVIGIVLERYIIKGMAAGAVK
>Mature_305_residues
SQTQIFHDHEADLGHKVKWYAKRVTVYGILLLWAFICLFPIYWTITTSFKLAPDVMQGNMIPFVDYTPQWRGWRSLGMSP
DTIGEYSTVRAEFVKRFLNSTIVALSASTLAVLLGSLAAYGLSRFEYRFGFMRNDDISFFFLSQLILPPVVLALPFLVLY
REIDMLDSRIGLILLYTLTVLPIVIWIMRDQFSSIPIELEEAALVDGLSIWGAFLTIIVPIALPGMVAAFILSLVLTWNE
YFFAALLTSTDATTLPVMVASQTGSQGINWWSMAALSTAAILPLIVIGIVLERYIIKGMAAGAVK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=287, Percent_Identity=29.9651567944251, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790464, Length=281, Percent_Identity=27.7580071174377, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789860, Length=222, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34211; Mature: 34080

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTQIFHDHEADLGHKVKWYAKRVTVYGILLLWAFICLFPIYWTITTSFKLAPDVMQGN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHCCC
MIPFVDYTPQWRGWRSLGMSPDTIGEYSTVRAEFVKRFLNSTIVALSASTLAVLLGSLAA
CEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLSRFEYRFGFMRNDDISFFFLSQLILPPVVLALPFLVLYREIDMLDSRIGLILLYTLT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPIVIWIMRDQFSSIPIELEEAALVDGLSIWGAFLTIIVPIALPGMVAAFILSLVLTWN
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFFAALLTSTDATTLPVMVASQTGSQGINWWSMAALSTAAILPLIVIGIVLERYIIKGM
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAVK
HCCCCC
>Mature Secondary Structure 
SQTQIFHDHEADLGHKVKWYAKRVTVYGILLLWAFICLFPIYWTITTSFKLAPDVMQGN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHCCC
MIPFVDYTPQWRGWRSLGMSPDTIGEYSTVRAEFVKRFLNSTIVALSASTLAVLLGSLAA
CEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLSRFEYRFGFMRNDDISFFFLSQLILPPVVLALPFLVLYREIDMLDSRIGLILLYTLT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPIVIWIMRDQFSSIPIELEEAALVDGLSIWGAFLTIIVPIALPGMVAAFILSLVLTWN
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFFAALLTSTDATTLPVMVASQTGSQGINWWSMAALSTAAILPLIVIGIVLERYIIKGM
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAVK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]