BacMap

Definition	Jannaschia sp. CCS1 chromosome, complete genome.
Accession	NC_007802
Length	4,317,977

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The map label for this gene is fabG [H]

Identifier: 89054597

GI number: 89054597

Start: 2114996

End: 2115730

Strand: Reverse

Name: fabG [H]

Synonym: Jann_2106

Alternate gene names: 89054597

Gene position: 2115730-2114996 (Counterclockwise)

Preceding gene: 89054601

Following gene: 89054596

Centisome position: 49.0

GC content: 63.67

Gene sequence:

>735_bases
ATGCGACTTCAGGGAAAACGGGCCGTTGTGACCGCCGCGGGGGCCGGTATCGGGCAGGCCACGGCCATCGCTTTTGCCGC
TGAGGGGGCGGAGGTCATAGCCACCGACATCAACCCCGACGCGCTTGGCCCGGTGAAGGATGCAGGATGCAGCGTGCAGC
CGTTGGACGTGACCGATGGCGATGCCATCGCGGACTTCACCGCACAGATCGGCGCGCCGGATATCCTGTTCAACTGCGCG
GGCTTTGTGCATCACGGCACCATTCTGGACTGTGACGACGACGCCTTTGATTTCAGCTTCAATCTGAACGTCCGGGCGAT
GTTCCGCATGACACGCGCGTTCCTGCCAGGGATGATCGACAATGGCGGCGCCAGTATCGTCAACATGGCCTCGGTCGTGT
CGTCGATCATCGCCGCGCCCAATCGGTTCGTCTATGGCGGGACCAAGGCCGCGGTGATTGGCATGACCAAAGGCATTGCG
GCGGATTTCGTGACACAGGGCATCCGCTGCAACGCGATCTGCCCCGGGACCGTCGACAGCCCCAGCCTGCAGGGTCGGAT
GCGCGCACAGGGGGATTACGGCACCGCCCGCGCCGCCTTTGTCGCCCGTCAACCCATGGGTCGGATTGCGGGCGCAGAGG
AAGTCGCCAAACTGGCTGTCTATCTGGCCAGCGATGACAGCGCCTTTGTGACCGGTCAGGCCATGGTGGTCGATGGCGGA
TGGTCGAACGTTTGA

Upstream 100 bases:

>100_bases
TTCACCTTGATCCTTGGGGTGGCCCGTCGATAACATGCTAGAATGTTAGCGATTGCCAGACATTTGGGCAATGCCCAAGC
GGGGCCAGAGGGAGAGGCGC

Downstream 100 bases:

>100_bases
GGAGTGAGCCAAAATGAAACTTTTGCGCTATGGCCCTGTCGGGTCCGAGAAACCCGGAATGCTGGACGCAGATGGCGACC
TGCGGGATCTGTCTGGCGAG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRLQGKRAVVTAAGAGIGQATAIAFAAEGAEVIATDINPDALGPVKDAGCSVQPLDVTDGDAIADFTAQIGAPDILFNCA
GFVHHGTILDCDDDAFDFSFNLNVRAMFRMTRAFLPGMIDNGGASIVNMASVVSSIIAAPNRFVYGGTKAAVIGMTKGIA
ADFVTQGIRCNAICPGTVDSPSLQGRMRAQGDYGTARAAFVARQPMGRIAGAEEVAKLAVYLASDDSAFVTGQAMVVDGG
WSNV

Sequences:

>Translated_244_residues
MRLQGKRAVVTAAGAGIGQATAIAFAAEGAEVIATDINPDALGPVKDAGCSVQPLDVTDGDAIADFTAQIGAPDILFNCA
GFVHHGTILDCDDDAFDFSFNLNVRAMFRMTRAFLPGMIDNGGASIVNMASVVSSIIAAPNRFVYGGTKAAVIGMTKGIA
ADFVTQGIRCNAICPGTVDSPSLQGRMRAQGDYGTARAAFVARQPMGRIAGAEEVAKLAVYLASDDSAFVTGQAMVVDGG
WSNV
>Mature_244_residues
MRLQGKRAVVTAAGAGIGQATAIAFAAEGAEVIATDINPDALGPVKDAGCSVQPLDVTDGDAIADFTAQIGAPDILFNCA
GFVHHGTILDCDDDAFDFSFNLNVRAMFRMTRAFLPGMIDNGGASIVNMASVVSSIIAAPNRFVYGGTKAAVIGMTKGIA
ADFVTQGIRCNAICPGTVDSPSLQGRMRAQGDYGTARAAFVARQPMGRIAGAEEVAKLAVYLASDDSAFVTGQAMVVDGG
WSNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=242, Percent_Identity=56.6115702479339, Blast_Score=268, Evalue=3e-72,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=31.0344827586207, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=32.3770491803279, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=29.7619047619048, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI142976729, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=25.6809338521401, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI59889578, Length=193, Percent_Identity=31.6062176165803, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=28.7937743190661, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI210032110, Length=192, Percent_Identity=26.0416666666667, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI40254992, Length=221, Percent_Identity=25.7918552036199, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI40807363, Length=196, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4504505, Length=191, Percent_Identity=27.2251308900524, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=37.4501992031873, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=31.9838056680162, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=31.640625, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=31.6, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=30.1587301587302, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=29.0836653386454, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=27.2357723577236, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=25.0996015936255, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=27.710843373494, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=28.6307053941909, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=30.9236947791165, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787820, Length=205, Percent_Identity=30.2439024390244, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=33.201581027668, Blast_Score=125, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=34.136546184739, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=34.8, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=33.7254901960784, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=32.2709163346614, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=29.7397769516729, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=31.9548872180451, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=28.9473684210526, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=31.3207547169811, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=32.5925925925926, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=30.0751879699248, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=31.2267657992565, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=30.2681992337165, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=272, Percent_Identity=28.3088235294118, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=29.1044776119403, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.5985130111524, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=28.2442748091603, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=28.996282527881, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.8389513108614, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=29.1497975708502, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=29.8429319371728, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=28.4584980237154, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=27.2058823529412, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=24.3027888446215, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=29.8850574712644, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=25.3807106598985, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=30.03663003663, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=26.8041237113402, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=26.0377358490566, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=28.6274509803922, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=33.59375, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=34, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=34.0163934426229, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=31.640625, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=33.201581027668, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=31.6, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=30.0813008130081, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=33.4645669291339, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581726, Length=192, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737361, Length=198, Percent_Identity=32.8282828282828, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25057; Mature: 25057

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQGKRAVVTAAGAGIGQATAIAFAAEGAEVIATDINPDALGPVKDAGCSVQPLDVTDG
CCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC
DAIADFTAQIGAPDILFNCAGFVHHGTILDCDDDAFDFSFNLNVRAMFRMTRAFLPGMID
CHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCC
NGGASIVNMASVVSSIIAAPNRFVYGGTKAAVIGMTKGIAADFVTQGIRCNAICPGTVDS
CCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHCCCEECEECCCCCCC
PSLQGRMRAQGDYGTARAAFVARQPMGRIAGAEEVAKLAVYLASDDSAFVTGQAMVVDGG
CCCCCEEEECCCCCCHHHHHHHHCCCHHHCCHHHHEEEEEEEECCCCEEEECEEEEEECC
WSNV
CCCC
>Mature Secondary Structure
MRLQGKRAVVTAAGAGIGQATAIAFAAEGAEVIATDINPDALGPVKDAGCSVQPLDVTDG
CCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC
DAIADFTAQIGAPDILFNCAGFVHHGTILDCDDDAFDFSFNLNVRAMFRMTRAFLPGMID
CHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCC
NGGASIVNMASVVSSIIAAPNRFVYGGTKAAVIGMTKGIAADFVTQGIRCNAICPGTVDS
CCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHCCCEECEECCCCCCC
PSLQGRMRAQGDYGTARAAFVARQPMGRIAGAEEVAKLAVYLASDDSAFVTGQAMVVDGG
CCCCCEEEECCCCCCHHHHHHHHCCCHHHCCHHHHEEEEEEEECCCCEEEECEEEEEECC
WSNV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]