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The map label for this gene is coxM [H]

Identifier: 89054588

GI number: 89054588

Start: 2106548

End: 2107402

Strand: Reverse

Name: coxM [H]

Synonym: Jann_2097

Alternate gene names: 89054588

Gene position: 2107402-2106548 (Counterclockwise)

Preceding gene: 89054589

Following gene: 89054587

Centisome position: 48.81

GC content: 63.74

Gene sequence:

>855_bases
ATGATTCCAGCGGCGTTTGAATATTATCGCCCCAAGGACATGGCCGGCGTCCTGTCCATTCTGCAAGAACACGGCGACGA
TGCCCGCGTCATGGCGGGCGGCCACAGCCTGATCCCCATGATGAAACTGCGCATGGCCGATATTCCGCATCTGATCGACC
TTCAGGGTCTGTCAGGCATGTCAGAGATTGAGGTGGGCGGTGACAGCATCCGCATCGGCGCGATGGTCACGCAGGCCGAC
ATCATCGACCATGCGGGCCTCACAGAGGCGGCTCCGATCCTGCGCGAGGCGGCCTTGCAGATCGCCGATCCTCAGGTGCG
GTACATGGGGACCGTCGGCGGCAATGTTGCCAACGGTGATCCGGGCAACGACATGCCGGGCCTGATGCAATGTCTGGATG
CCTCCTTCACCGTCGTGGGGCCCAAGGGCGAGCGTGAGATCCCGGCGCGGGCGTTCTACGAGGCGGCCTATATGACCGAG
CGCGAGGATGACGAAGTGCTGACCACAGTGACGATCCCCATGCCCCGGGGCGGCTATTCCTACGAGAAGCAGAAGCGCAA
GATTGGCGATTATGCGACCGCCGCCGCCGCCGTGCAGATGACCAAAGACGGCGATACCTGCACCAGCGCGTCTATCGCGA
TGACGAACCTCAGCGACACACCGATCTTTTCCAAGGCCGCAGGTGCGGCGCTTGTGGGCACGGTTGTGGACGCGACCGCC
TTGGACGCTGCTGTCGCCGCCATGTTGGGCGACATCGACCCGACCGAGGACAACCGCGGCCCCGTCGCCTTCAAGAACCA
CGTGGCAGGCGTCATCCTGCGCCGCGCGATCGAACGCGCTTGGTCACGCGCCTAA

Upstream 100 bases:

>100_bases
CAAGGACCCCGTGTTTCATGAGTTTTCCCGTGCCCTGACATGCCAGGGCATGCAGTCTCTCTCTTAGCCAGAACATTCGC
TTTAAGGGAGGAGAAAGCCG

Downstream 100 bases:

>100_bases
GCAGCGTCAGGGAGAAACACACTATGCCTAAGAAAATGCACATCACGCTCAACGTGAACGGCAAGGAAGAGGAATTCCTG
GCCGAGCCGCGCGAATTGCT

Product: carbon monoxide dehydrogenase, medium subunit

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIPAAFEYYRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMADIPHLIDLQGLSGMSEIEVGGDSIRIGAMVTQAD
IIDHAGLTEAAPILREAALQIADPQVRYMGTVGGNVANGDPGNDMPGLMQCLDASFTVVGPKGEREIPARAFYEAAYMTE
REDDEVLTTVTIPMPRGGYSYEKQKRKIGDYATAAAAVQMTKDGDTCTSASIAMTNLSDTPIFSKAAGAALVGTVVDATA
LDAAVAAMLGDIDPTEDNRGPVAFKNHVAGVILRRAIERAWSRA

Sequences:

>Translated_284_residues
MIPAAFEYYRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMADIPHLIDLQGLSGMSEIEVGGDSIRIGAMVTQAD
IIDHAGLTEAAPILREAALQIADPQVRYMGTVGGNVANGDPGNDMPGLMQCLDASFTVVGPKGEREIPARAFYEAAYMTE
REDDEVLTTVTIPMPRGGYSYEKQKRKIGDYATAAAAVQMTKDGDTCTSASIAMTNLSDTPIFSKAAGAALVGTVVDATA
LDAAVAAMLGDIDPTEDNRGPVAFKNHVAGVILRRAIERAWSRA
>Mature_284_residues
MIPAAFEYYRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMADIPHLIDLQGLSGMSEIEVGGDSIRIGAMVTQAD
IIDHAGLTEAAPILREAALQIADPQVRYMGTVGGNVANGDPGNDMPGLMQCLDASFTVVGPKGEREIPARAFYEAAYMTE
REDDEVLTTVTIPMPRGGYSYEKQKRKIGDYATAAAAVQMTKDGDTCTSASIAMTNLSDTPIFSKAAGAALVGTVVDATA
LDAAVAAMLGDIDPTEDNRGPVAFKNHVAGVILRRAIERAWSRA

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=278, Percent_Identity=24.8201438848921, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 30113; Mature: 30113

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAAFEYYRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMADIPHLIDLQGLSGM
CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCCCCC
SEIEVGGDSIRIGAMVTQADIIDHAGLTEAAPILREAALQIADPQVRYMGTVGGNVANGD
CEEEECCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGNDMPGLMQCLDASFTVVGPKGEREIPARAFYEAAYMTEREDDEVLTTVTIPMPRGGYS
CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
YEKQKRKIGDYATAAAAVQMTKDGDTCTSASIAMTNLSDTPIFSKAAGAALVGTVVDATA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHH
LDAAVAAMLGDIDPTEDNRGPVAFKNHVAGVILRRAIERAWSRA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPAAFEYYRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMADIPHLIDLQGLSGM
CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCCCCC
SEIEVGGDSIRIGAMVTQADIIDHAGLTEAAPILREAALQIADPQVRYMGTVGGNVANGD
CEEEECCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGNDMPGLMQCLDASFTVVGPKGEREIPARAFYEAAYMTEREDDEVLTTVTIPMPRGGYS
CCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
YEKQKRKIGDYATAAAAVQMTKDGDTCTSASIAMTNLSDTPIFSKAAGAALVGTVVDATA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHH
LDAAVAAMLGDIDPTEDNRGPVAFKNHVAGVILRRAIERAWSRA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]