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The map label for this gene is yliC [C]

Identifier: 89054545

GI number: 89054545

Start: 2059214

End: 2060224

Strand: Direct

Name: yliC [C]

Synonym: Jann_2054

Alternate gene names: 89054545

Gene position: 2059214-2060224 (Clockwise)

Preceding gene: 89054544

Following gene: 89054546

Centisome position: 47.69

GC content: 59.55

Gene sequence:

>1011_bases
ATGGGACGCATACCGCTGTCATACCTGGGCAACCGCCTGTTCACGTTCGTTCTGACCGTGTTCATCGCGGCCACGCTGAT
CTGGATCATCCCGCGCCTGTCGCCCGTGGACCCTGTGGATGTCATGCTCGGACGCATGGCGGCGGGGGGCGGTTCGGTGG
AGAACTCCTCCGCGATCCTCGATCAACTCCGCTCCAGCTTCGGGCTCGATCAGCCGCTGATCGTGCAGTACCTGCTGTAT
ATCAAGAACACGCTGACCTTCGATTTTGGCCTCTCGACGGCGTCCTTCCCCACGCCTGTGTCGTCAATGATCGCCAACGC
GCTGCCGTGGACGCTTGGCCTGATGGTCATCTCGCTCATCATCACCTTCGTTGTCGGCAACCTTCTGGGGGCCTTGATGG
TGTGGGAAGAAAGCCCGAACCTTGTGAAAGTCGCGATCCCGGCGGCCATGGTCTTCACCTCGATCCCGCCGATCCTGTCG
GGGCTTTTGCTGATGTATGTCTTCTCCACCCAACTGCGGTGGTTCCCGTTGAATGGCGCCTACGGTCTGAATGTAGAGCC
CGGCTGGAGCATGGATTTCGCGCTGTCGGTCGCCTATCACGGGTTCCTGCCTGCGCTGTCCATCGTGGTCGTCACCTTCG
GGTTCTGGGCGCTTGGGATGCGCGGTCTGATGATCACCGTGCAGGGCGAGGACTATACAACGCTGGCCAAGGCCAAGGGC
CTGAAACCGCGCTATATCCTGTACCGTTACATGATCCGCAACGCGATCCTGCCGCAGATCACGGCGTTTGCGCTCAAGAT
CGGGATGTTGGTCGCGGGGCAGGTGCTGGTGGAGCGCATCTTCGCCTATAACGGCATGGGCAAGCTGCTTTATGATGCGA
TCCTTGATCAGGACTTTCCGGTGATCCAGGGGGTCAGTTTCGTGATCATCCTGATGACCGCGCTGGCCGTTTTCTTCGTT
GATCTGATCTATCCGCTGATCGATCCCCGTATTCGTCATGAGGGGACCTGA

Upstream 100 bases:

>100_bases
TCATCCACAACCTGACGCGCGTGGAATGATCTGACGCAAGCAATGCGGGCCGGGGCGGCGCAACGCCCCGGTCATTTCAA
AGGGGGGAGGGAGCCCGATC

Downstream 100 bases:

>100_bases
GCCATGACACATGTTCCCGAGGTTCAAACCAACCTGACCCGCCGCCAGAAGCGCCGGATGAAGCGGTTCGACAATCCATG
GCGCAACCCCAAGCTGATCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MGRIPLSYLGNRLFTFVLTVFIAATLIWIIPRLSPVDPVDVMLGRMAAGGGSVENSSAILDQLRSSFGLDQPLIVQYLLY
IKNTLTFDFGLSTASFPTPVSSMIANALPWTLGLMVISLIITFVVGNLLGALMVWEESPNLVKVAIPAAMVFTSIPPILS
GLLLMYVFSTQLRWFPLNGAYGLNVEPGWSMDFALSVAYHGFLPALSIVVVTFGFWALGMRGLMITVQGEDYTTLAKAKG
LKPRYILYRYMIRNAILPQITAFALKIGMLVAGQVLVERIFAYNGMGKLLYDAILDQDFPVIQGVSFVIILMTALAVFFV
DLIYPLIDPRIRHEGT

Sequences:

>Translated_336_residues
MGRIPLSYLGNRLFTFVLTVFIAATLIWIIPRLSPVDPVDVMLGRMAAGGGSVENSSAILDQLRSSFGLDQPLIVQYLLY
IKNTLTFDFGLSTASFPTPVSSMIANALPWTLGLMVISLIITFVVGNLLGALMVWEESPNLVKVAIPAAMVFTSIPPILS
GLLLMYVFSTQLRWFPLNGAYGLNVEPGWSMDFALSVAYHGFLPALSIVVVTFGFWALGMRGLMITVQGEDYTTLAKAKG
LKPRYILYRYMIRNAILPQITAFALKIGMLVAGQVLVERIFAYNGMGKLLYDAILDQDFPVIQGVSFVIILMTALAVFFV
DLIYPLIDPRIRHEGT
>Mature_335_residues
GRIPLSYLGNRLFTFVLTVFIAATLIWIIPRLSPVDPVDVMLGRMAAGGGSVENSSAILDQLRSSFGLDQPLIVQYLLYI
KNTLTFDFGLSTASFPTPVSSMIANALPWTLGLMVISLIITFVVGNLLGALMVWEESPNLVKVAIPAAMVFTSIPPILSG
LLLMYVFSTQLRWFPLNGAYGLNVEPGWSMDFALSVAYHGFLPALSIVVVTFGFWALGMRGLMITVQGEDYTTLAKAKGL
KPRYILYRYMIRNAILPQITAFALKIGMLVAGQVLVERIFAYNGMGKLLYDAILDQDFPVIQGVSFVIILMTALAVFFVD
LIYPLIDPRIRHEGT

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=331, Percent_Identity=31.7220543806647, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789888, Length=335, Percent_Identity=33.134328358209, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1789965, Length=341, Percent_Identity=31.6715542521994, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787761, Length=346, Percent_Identity=32.3699421965318, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1788504, Length=372, Percent_Identity=26.6129032258064, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787497, Length=328, Percent_Identity=24.6951219512195, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=22.7436823104693, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36974; Mature: 36842

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIPLSYLGNRLFTFVLTVFIAATLIWIIPRLSPVDPVDVMLGRMAAGGGSVENSSAIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH
DQLRSSFGLDQPLIVQYLLYIKNTLTFDFGLSTASFPTPVSSMIANALPWTLGLMVISLI
HHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ITFVVGNLLGALMVWEESPNLVKVAIPAAMVFTSIPPILSGLLLMYVFSTQLRWFPLNGA
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCE
YGLNVEPGWSMDFALSVAYHGFLPALSIVVVTFGFWALGMRGLMITVQGEDYTTLAKAKG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCC
LKPRYILYRYMIRNAILPQITAFALKIGMLVAGQVLVERIFAYNGMGKLLYDAILDQDFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
VIQGVSFVIILMTALAVFFVDLIYPLIDPRIRHEGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GRIPLSYLGNRLFTFVLTVFIAATLIWIIPRLSPVDPVDVMLGRMAAGGGSVENSSAIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH
DQLRSSFGLDQPLIVQYLLYIKNTLTFDFGLSTASFPTPVSSMIANALPWTLGLMVISLI
HHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ITFVVGNLLGALMVWEESPNLVKVAIPAAMVFTSIPPILSGLLLMYVFSTQLRWFPLNGA
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCE
YGLNVEPGWSMDFALSVAYHGFLPALSIVVVTFGFWALGMRGLMITVQGEDYTTLAKAKG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCC
LKPRYILYRYMIRNAILPQITAFALKIGMLVAGQVLVERIFAYNGMGKLLYDAILDQDFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
VIQGVSFVIILMTALAVFFVDLIYPLIDPRIRHEGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]