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The map label for this gene is oppC [H]

Identifier: 89054546

GI number: 89054546

Start: 2060228

End: 2061157

Strand: Direct

Name: oppC [H]

Synonym: Jann_2055

Alternate gene names: 89054546

Gene position: 2060228-2061157 (Clockwise)

Preceding gene: 89054545

Following gene: 89054547

Centisome position: 47.71

GC content: 61.83

Gene sequence:

>930_bases
ATGACACATGTTCCCGAGGTTCAAACCAACCTGACCCGCCGCCAGAAGCGCCGGATGAAGCGGTTCGACAATCCATGGCG
CAACCCCAAGCTGATCTGGGGCGCGGCGCTTTTGCTTGGCGTCGTCGCGCTTGGCATCCTGGGGCGCTTGTTTTGGGATA
CGGATCTGGTCTTCACCGGATCGTCGCCTGCACGGCTTCCTCCGCCGGGGTTTGAAAACCTGCGCGGGCAGGCGGGGCAG
ATCGCCCACCCGCTTGGCACCGATGTGGCGGGCAAGGATATGCTGGCGCTGCTGATCGTGGGCGCGCCGAATTCACTGTT
CGTGGGGTTGTTAGCTTCTCTGATCGGGATGAGCATTGGCATCTTTCTCGGCTTCTCCGCAGGCTTCATGCGCGGGCGCA
TCGACGACGTGATCCGTGTGGGATCGGACGTGATGATCACCATTCCGCCGCTGTTGATCCTGGTGGTCTTTCAGGCCGCC
TATGGGGACATATCGCTGACCATGATGGCGGTGTTGATCGCGGCCTTCGTCTGGCAATCGCCCACCCGCCTGATCCGCGC
GCAGGTCCTGTCCATGCGCGAGAGCGGTTACGTCCAGATGGCCCGCCTCTCGGGTGCATCGACCATGCACATTATGTTCC
GCGAGATGTTGCCGAACCTGGTGCCGTACCTGTTCGGGTCGTTCATCGCCAATGTAACCACGGCTATTGTCACGGCCGTG
GGGCTGGAGGTTCTGGGCCTTGGTCCCCAGCGCATCCCAACCCTTGGCCGTGTGATCTACGACGCCATCAACTCCGGTGC
CTTGATCCAGAACCTCTGGTGGTGGTGGGGCATCCCAACGCTGCTGCTGGCGGTGATGTTCATCGGGCTCTTGCTGGTGA
ACCTCGGCCTTGATGAAGTCTCCAACCCCCGCCTGCGGAGGCTGTCATGA

Upstream 100 bases:

>100_bases
CAGTTTCGTGATCATCCTGATGACCGCGCTGGCCGTTTTCTTCGTTGATCTGATCTATCCGCTGATCGATCCCCGTATTC
GTCATGAGGGGACCTGAGCC

Downstream 100 bases:

>100_bases
GTATTCTCGACATCAACAACGTCTCCATTGATTTCCCGACATCCAAGGGGATTGTCCACGCTGTCACCAATATCTCCATG
ACGGTGGAGAAAGGGCGGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTHVPEVQTNLTRRQKRRMKRFDNPWRNPKLIWGAALLLGVVALGILGRLFWDTDLVFTGSSPARLPPPGFENLRGQAGQ
IAHPLGTDVAGKDMLALLIVGAPNSLFVGLLASLIGMSIGIFLGFSAGFMRGRIDDVIRVGSDVMITIPPLLILVVFQAA
YGDISLTMMAVLIAAFVWQSPTRLIRAQVLSMRESGYVQMARLSGASTMHIMFREMLPNLVPYLFGSFIANVTTAIVTAV
GLEVLGLGPQRIPTLGRVIYDAINSGALIQNLWWWWGIPTLLLAVMFIGLLLVNLGLDEVSNPRLRRLS

Sequences:

>Translated_309_residues
MTHVPEVQTNLTRRQKRRMKRFDNPWRNPKLIWGAALLLGVVALGILGRLFWDTDLVFTGSSPARLPPPGFENLRGQAGQ
IAHPLGTDVAGKDMLALLIVGAPNSLFVGLLASLIGMSIGIFLGFSAGFMRGRIDDVIRVGSDVMITIPPLLILVVFQAA
YGDISLTMMAVLIAAFVWQSPTRLIRAQVLSMRESGYVQMARLSGASTMHIMFREMLPNLVPYLFGSFIANVTTAIVTAV
GLEVLGLGPQRIPTLGRVIYDAINSGALIQNLWWWWGIPTLLLAVMFIGLLLVNLGLDEVSNPRLRRLS
>Mature_308_residues
THVPEVQTNLTRRQKRRMKRFDNPWRNPKLIWGAALLLGVVALGILGRLFWDTDLVFTGSSPARLPPPGFENLRGQAGQI
AHPLGTDVAGKDMLALLIVGAPNSLFVGLLASLIGMSIGIFLGFSAGFMRGRIDDVIRVGSDVMITIPPLLILVVFQAAY
GDISLTMMAVLIAAFVWQSPTRLIRAQVLSMRESGYVQMARLSGASTMHIMFREMLPNLVPYLFGSFIANVTTAIVTAVG
LEVLGLGPQRIPTLGRVIYDAINSGALIQNLWWWWGIPTLLLAVMFIGLLLVNLGLDEVSNPRLRRLS

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=245, Percent_Identity=29.7959183673469, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787054, Length=180, Percent_Identity=31.6666666666667, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789964, Length=249, Percent_Identity=30.1204819277108, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787549, Length=298, Percent_Identity=29.5302013422819, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788505, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789889, Length=186, Percent_Identity=27.9569892473118, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1787498, Length=228, Percent_Identity=25.4385964912281, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33841; Mature: 33710

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVPEVQTNLTRRQKRRMKRFDNPWRNPKLIWGAALLLGVVALGILGRLFWDTDLVFTG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SSPARLPPPGFENLRGQAGQIAHPLGTDVAGKDMLALLIVGAPNSLFVGLLASLIGMSIG
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
IFLGFSAGFMRGRIDDVIRVGSDVMITIPPLLILVVFQAAYGDISLTMMAVLIAAFVWQS
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PTRLIRAQVLSMRESGYVQMARLSGASTMHIMFREMLPNLVPYLFGSFIANVTTAIVTAV
HHHHHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLEVLGLGPQRIPTLGRVIYDAINSGALIQNLWWWWGIPTLLLAVMFIGLLLVNLGLDEV
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
SNPRLRRLS
CCCHHHCCC
>Mature Secondary Structure 
THVPEVQTNLTRRQKRRMKRFDNPWRNPKLIWGAALLLGVVALGILGRLFWDTDLVFTG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SSPARLPPPGFENLRGQAGQIAHPLGTDVAGKDMLALLIVGAPNSLFVGLLASLIGMSIG
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
IFLGFSAGFMRGRIDDVIRVGSDVMITIPPLLILVVFQAAYGDISLTMMAVLIAAFVWQS
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PTRLIRAQVLSMRESGYVQMARLSGASTMHIMFREMLPNLVPYLFGSFIANVTTAIVTAV
HHHHHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLEVLGLGPQRIPTLGRVIYDAINSGALIQNLWWWWGIPTLLLAVMFIGLLLVNLGLDEV
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
SNPRLRRLS
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244921; 11337471 [H]