Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is catE [H]
Identifier: 89054510
GI number: 89054510
Start: 2023013
End: 2023543
Strand: Reverse
Name: catE [H]
Synonym: Jann_2019
Alternate gene names: 89054510
Gene position: 2023543-2023013 (Counterclockwise)
Preceding gene: 89054511
Following gene: 89054506
Centisome position: 46.86
GC content: 63.28
Gene sequence:
>531_bases ATGACATGGGCGACTGAGCAGCCAGCCTATATAGCGCCGGCCGGAACCACCATTGGCCACGTGCATTTGCGCGTGGCCGA CCTTAATCGCGCGATTACGTTCTATTGTGGCGTGCTCGGGTTTCAGGTGCAGGCGCGTATTGGGGATGATGCGGCGTTTC TGGGCGCGCCCATGGCGGGCGAGGACGGCACGATCTACCACCATCATATCGGCCTGAATACATGGACCAGCCGCGGCGGC AAACCACCCGCTCCGGGGCATACGGGACTCTATCACGCCGCCATTCTCTATCCGTCCCGCGCCGATCTCGCAGGGGCTGT GCGCCGGGTTGTCGAAGCAGGTATTCCGCTGTCGGGCGCAACCGATCACGGGATTTCCGAGGCGGTCTATCTGGATGACC CTGACGGCAATGGCATCGAGCTCTACCACGACCGTGTGCCGGAAGACTGGCCGCGTGATGCAAGGGGAGCGCTGAAGATG GCGCGCCGCCCGCTCGATGTGAACGCGCTCCTGAGTGATGCGGCAACCTAG
Upstream 100 bases:
>100_bases CAATCGTTGCAGGCGGCGGGGCCAAAGCTGTCGACATGGGCGAAGCGACGATGGATGGCTTTATCGCAACCCTTGACAGC GAATTGACAGCGGCAGCGCA
Downstream 100 bases:
>100_bases AACGCGGCAATGATCGCGACCGTTCTTGTCACGGAAATTTCTGGCCAAGAAGACCTCGTCGTCGTCACGGCAATTCTTGG TAGACATATGTCGCAAACAA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTWATEQPAYIAPAGTTIGHVHLRVADLNRAITFYCGVLGFQVQARIGDDAAFLGAPMAGEDGTIYHHHIGLNTWTSRGG KPPAPGHTGLYHAAILYPSRADLAGAVRRVVEAGIPLSGATDHGISEAVYLDDPDGNGIELYHDRVPEDWPRDARGALKM ARRPLDVNALLSDAAT
Sequences:
>Translated_176_residues MTWATEQPAYIAPAGTTIGHVHLRVADLNRAITFYCGVLGFQVQARIGDDAAFLGAPMAGEDGTIYHHHIGLNTWTSRGG KPPAPGHTGLYHAAILYPSRADLAGAVRRVVEAGIPLSGATDHGISEAVYLDDPDGNGIELYHDRVPEDWPRDARGALKM ARRPLDVNALLSDAAT >Mature_175_residues TWATEQPAYIAPAGTTIGHVHLRVADLNRAITFYCGVLGFQVQARIGDDAAFLGAPMAGEDGTIYHHHIGLNTWTSRGGK PPAPGHTGLYHAAILYPSRADLAGAVRRVVEAGIPLSGATDHGISEAVYLDDPDGNGIELYHDRVPEDWPRDARGALKMA RRPLDVNALLSDAAT
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 18771; Mature: 18640
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS ; PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWATEQPAYIAPAGTTIGHVHLRVADLNRAITFYCGVLGFQVQARIGDDAAFLGAPMAG CCCCCCCCCEEECCCCEEEEEEEEEECCCHHHHHHHHHHCEEEEEEECCCCHHHCCCCCC EDGTIYHHHIGLNTWTSRGGKPPAPGHTGLYHAAILYPSRADLAGAVRRVVEAGIPLSGA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC TDHGISEAVYLDDPDGNGIELYHDRVPEDWPRDARGALKMARRPLDVNALLSDAAT CCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure TWATEQPAYIAPAGTTIGHVHLRVADLNRAITFYCGVLGFQVQARIGDDAAFLGAPMAG CCCCCCCCEEECCCCEEEEEEEEEECCCHHHHHHHHHHCEEEEEEECCCCHHHCCCCCC EDGTIYHHHIGLNTWTSRGGKPPAPGHTGLYHAAILYPSRADLAGAVRRVVEAGIPLSGA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC TDHGISEAVYLDDPDGNGIELYHDRVPEDWPRDARGALKMARRPLDVNALLSDAAT CCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]