Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054506

Identifier: 89054506

GI number: 89054506

Start: 2020827

End: 2021444

Strand: Reverse

Name: 89054506

Synonym: Jann_2015

Alternate gene names: NA

Gene position: 2021444-2020827 (Counterclockwise)

Preceding gene: 89054510

Following gene: 89054505

Centisome position: 46.81

GC content: 62.94

Gene sequence:

>618_bases
ATGACCGACCAGAATGACAGCAACAAAAAGTGGTACAAAACAGGCCGTGGTCGTCTGTTTGCAGGCATAGCTGCGGCTGC
CTGCATCGTGCTTGGGGCGCAGGCCATTGCGCAGACTCGTCCGGCGCAGCACCTTGCCCAGTTCGTTTCCGATGGCGGTA
CGCCGGAGTTCATGGAGGCGCAGTTTCGGCCCGGCCATGGCCACGGGTTCGGACCGGGGCGCGGCAGTCCGTTCGAGGAC
ATGAGCGAGGAAGAAATCGACCGCATGGTCGCGCGGGGCGTCGCCCACGCCGCGATTGAGTTGGGCGCAACAGATGCGCA
ACGCGACCAGATCACCGAGATTGTCGTGGCGCTTGTGCAGGAAATGCGACCGCTCGCCGATGGGTTCCGTGAAGCGGCGA
CGGAACTGCAAAGCCTTCTCCTGGCTGAAGACGTTGACGCCGAAGCGCTTGAGGCGATCCGCGCAGAACGTCTTGCGGAG
GCCGACCGTGTCAGCCGTGAGATGGTGACGGCCCTGACAGAGATTGCGGGTATTCTGACCGCCGAGCAGCGCCAAACAGC
GGCCGAGCGGATAGAATTCTTCCGCGAAATGCGCGAACGTCGCCGCGGTGAAGACTGA

Upstream 100 bases:

>100_bases
ATGCTACCGACTTCACAGAACTTTACGTTCACGACAAACGTCAGCAACACCGCGCGCATAGGTCTGGGTCATCGAAACTT
ACCAGCCATGGGGCGAACTG

Downstream 100 bases:

>100_bases
CCCTCGCTGCAAGGAGACCCGATGACAGACGCCATACTGCTGGTCGAAGATGACACACGCCTCGCCGAGATGGTCGCAAG
CTATCTCGGCGGGAACGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDQNDSNKKWYKTGRGRLFAGIAAAACIVLGAQAIAQTRPAQHLAQFVSDGGTPEFMEAQFRPGHGHGFGPGRGSPFED
MSEEEIDRMVARGVAHAAIELGATDAQRDQITEIVVALVQEMRPLADGFREAATELQSLLLAEDVDAEALEAIRAERLAE
ADRVSREMVTALTEIAGILTAEQRQTAAERIEFFREMRERRRGED

Sequences:

>Translated_205_residues
MTDQNDSNKKWYKTGRGRLFAGIAAAACIVLGAQAIAQTRPAQHLAQFVSDGGTPEFMEAQFRPGHGHGFGPGRGSPFED
MSEEEIDRMVARGVAHAAIELGATDAQRDQITEIVVALVQEMRPLADGFREAATELQSLLLAEDVDAEALEAIRAERLAE
ADRVSREMVTALTEIAGILTAEQRQTAAERIEFFREMRERRRGED
>Mature_204_residues
TDQNDSNKKWYKTGRGRLFAGIAAAACIVLGAQAIAQTRPAQHLAQFVSDGGTPEFMEAQFRPGHGHGFGPGRGSPFEDM
SEEEIDRMVARGVAHAAIELGATDAQRDQITEIVVALVQEMRPLADGFREAATELQSLLLAEDVDAEALEAIRAERLAEA
DRVSREMVTALTEIAGILTAEQRQTAAERIEFFREMRERRRGED

Specific function: Unknown

COG id: COG3678

COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22526; Mature: 22394

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQNDSNKKWYKTGRGRLFAGIAAAACIVLGAQAIAQTRPAQHLAQFVSDGGTPEFMEA
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
QFRPGHGHGFGPGRGSPFEDMSEEEIDRMVARGVAHAAIELGATDAQRDQITEIVVALVQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EMRPLADGFREAATELQSLLLAEDVDAEALEAIRAERLAEADRVSREMVTALTEIAGILT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQRQTAAERIEFFREMRERRRGED
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDQNDSNKKWYKTGRGRLFAGIAAAACIVLGAQAIAQTRPAQHLAQFVSDGGTPEFMEA
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
QFRPGHGHGFGPGRGSPFEDMSEEEIDRMVARGVAHAAIELGATDAQRDQITEIVVALVQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EMRPLADGFREAATELQSLLLAEDVDAEALEAIRAERLAEADRVSREMVTALTEIAGILT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQRQTAAERIEFFREMRERRRGED
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA