Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054508
Identifier: 89054508
GI number: 89054508
Start: 2022068
End: 2022463
Strand: Direct
Name: 89054508
Synonym: Jann_2017
Alternate gene names: NA
Gene position: 2022068-2022463 (Clockwise)
Preceding gene: 89054507
Following gene: 89054509
Centisome position: 46.83
GC content: 56.06
Gene sequence:
>396_bases ATGCTCTATGAATTGACCAAAACAGCGCATCTTGTCTCACTCTTCGTCTGGACCGGCGGCATGGTCGCCGTTGGACTGGC GCTCAGGTATCCGGCAGACGGCTTCCTGAAGCCGCTCAAAACCTATGACCGTGCCGTCACAACACCCGCCATGATCGCCG CTCTCCTGTTCGGCATTCTACTGGGCATTCAGGGCGGATGGTTCTCGTCCGGATGGCTTGGGATGAAGATCATTCTGGTT CTGGTTTTGTCCGGTCTTCATGGCGCGCTGATCGGCAGGTTGCGCAAAGCGATCTGGGAAAGTCCGCGCGAGATCAAACC CGGAGGCAAGATGTTCCTGCCCATTGGACTGGTTGTTCTGACGCTGATTGTCTTGCTTGTGACGATCAAACCCTGA
Upstream 100 bases:
>100_bases GGCTTCGGAACCGTCCGGCTGGTCCTTGGGGCATTTGTACCGGGCGCAGGCTTCATCAATGAACGTTGGCTGCGTCGTCA GTCAGAAGAGGAGGGGCGCG
Downstream 100 bases:
>100_bases CTTTGAGAAGGAGTTGATCCATGGCCTTTGGAGGTCCCAAAAAGCGAGGGCGCATCCAGATGATCCTGATCGCAACGGCG GACTGGTTGAGGAACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLYELTKTAHLVSLFVWTGGMVAVGLALRYPADGFLKPLKTYDRAVTTPAMIAALLFGILLGIQGGWFSSGWLGMKIILV LVLSGLHGALIGRLRKAIWESPREIKPGGKMFLPIGLVVLTLIVLLVTIKP
Sequences:
>Translated_131_residues MLYELTKTAHLVSLFVWTGGMVAVGLALRYPADGFLKPLKTYDRAVTTPAMIAALLFGILLGIQGGWFSSGWLGMKIILV LVLSGLHGALIGRLRKAIWESPREIKPGGKMFLPIGLVVLTLIVLLVTIKP >Mature_131_residues MLYELTKTAHLVSLFVWTGGMVAVGLALRYPADGFLKPLKTYDRAVTTPAMIAALLFGILLGIQGGWFSSGWLGMKIILV LVLSGLHGALIGRLRKAIWESPREIKPGGKMFLPIGLVVLTLIVLLVTIKP
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14183; Mature: 14183
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYELTKTAHLVSLFVWTGGMVAVGLALRYPADGFLKPLKTYDRAVTTPAMIAALLFGIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LGIQGGWFSSGWLGMKIILVLVLSGLHGALIGRLRKAIWESPREIKPGGKMFLPIGLVVL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TLIVLLVTIKP HHHHHHHHCCC >Mature Secondary Structure MLYELTKTAHLVSLFVWTGGMVAVGLALRYPADGFLKPLKTYDRAVTTPAMIAALLFGIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LGIQGGWFSSGWLGMKIILVLVLSGLHGALIGRLRKAIWESPREIKPGGKMFLPIGLVVL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TLIVLLVTIKP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA