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The map label for this gene is ccmE [H]

Identifier: 89054509

GI number: 89054509

Start: 2022477

End: 2022749

Strand: Direct

Name: ccmE [H]

Synonym: Jann_2018

Alternate gene names: 89054509

Gene position: 2022477-2022749 (Clockwise)

Preceding gene: 89054508

Following gene: 89054512

Centisome position: 46.84

GC content: 55.68

Gene sequence:

>273_bases
TTGATCCATGGCCTTTGGAGGTCCCAAAAAGCGAGGGCGCATCCAGATGATCCTGATCGCAACGGCGGACTGGTTGAGGA
ACGCACGCTGATGCGAGGCGAGGGCAGCACAATCACGTTTCGTGTGACAGATGGCTGTGGAGCCGTGCCGGTCAGCTACA
ATGGAATTCTGCGGGACCTTATTGCAAAGGCTCAAGGCATGATTGGCACCAGGCGATTCATCGACGGCAACTGTGTGGCG
ACCGAAATTCTCGCCCGACATGATGAAACCTAA

Upstream 100 bases:

>100_bases
GAGATCAAACCCGGAGGCAAGATGTTCCTGCCCATTGGACTGGTTGTTCTGACGCTGATTGTCTTGCTTGTGACGATCAA
ACCCTGACTTTGAGAAGGAG

Downstream 100 bases:

>100_bases
GAGCCCCGCGAGGTTTTAGACGCGCTTTAGGAGCAAGGTGTATATTGACCCGCAGAGGGCTGACTGGTCCAGTGTTCGGG
TTCTGCTTCCGCGTTGTAGG

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: Cytochrome c maturation protein E; Heme chaperone CcmE [H]

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIHGLWRSQKARAHPDDPDRNGGLVEERTLMRGEGSTITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGNCVA
TEILARHDET

Sequences:

>Translated_90_residues
MIHGLWRSQKARAHPDDPDRNGGLVEERTLMRGEGSTITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGNCVA
TEILARHDET
>Mature_90_residues
MIHGLWRSQKARAHPDDPDRNGGLVEERTLMRGEGSTITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGNCVA
TEILARHDET

Specific function: Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH [H]

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmE/CycJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004329
- InterPro:   IPR012340 [H]

Pfam domain/function: PF03100 CcmE [H]

EC number: NA

Molecular weight: Translated: 9893; Mature: 9893

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHGLWRSQKARAHPDDPDRNGGLVEERTLMRGEGSTITFRVTDGCGAVPVSYNGILRDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCEEEEEECCCCCCCCCCHHHHHHHH
IAKAQGMIGTRRFIDGNCVATEILARHDET
HHHHHCCCCCCEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure
MIHGLWRSQKARAHPDDPDRNGGLVEERTLMRGEGSTITFRVTDGCGAVPVSYNGILRDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCEEEEEECCCCCCCCCCHHHHHHHH
IAKAQGMIGTRRFIDGNCVATEILARHDET
HHHHHCCCCCCEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA