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The map label for this gene is ycfQ [C]

Identifier: 89054503

GI number: 89054503

Start: 2018164

End: 2018751

Strand: Reverse

Name: ycfQ [C]

Synonym: Jann_2012

Alternate gene names: 89054503

Gene position: 2018751-2018164 (Counterclockwise)

Preceding gene: 89054504

Following gene: 89054502

Centisome position: 46.75

GC content: 60.37

Gene sequence:

>588_bases
ATGCCACGCCTAAACTCATTCACCACGCGCCAACTGACTGACCGAGCCTTGCACCGTTTCTGGGTTCATGGGTTCTATGC
CTCGTCCATGGACGACTTGGTCAGGGCGACAGGGGTCAGCCGTCACGGGATTTACACGACGTTTGGCGGAAAGAATGCGA
TGTTCCTCGCCTGTCTTGACCAATATCAGCGAACCGTCGTGACCCCCGCATTCGAAGTCGTTGAGGCGGCGGGCGCCGAT
CTGACCAGCGTGGCGGCCTACTTTGAGACGCAGATCGCGCACGGCGAAGCGGCGGGGCTCCCCGGACCGGGGTGTTTCGT
AGCCAATTCCGCAACCGAAGTCGCGCCAGACGACGCCGATGTCATGGCCTTGGTTCATCAACACAACGACCGTTTGCGGC
AGGGCTTCGCGGCGGCGCTTCGGCAAACCGCACCTGCATTCGACCAGGACAAGGCTCTGGAACTGGCCGAGGTGATGGTC
ATCTTCACCAACGGACTATGGACCAGATCCCGAAGCGTCAGCGACGCAACTGTCCTGCGCCGCGCCGTCGAAAATTTCCT
CAGTCTTCTCGTGGAACGCACAAGATGA

Upstream 100 bases:

>100_bases
GTGCGCCGAAACGCCTGATCGGCGGGGCACTGCTGACGATCGCTGCGTTCTCGGCGAGGCTCACTTGTAGCAGAACGTTT
ATTCTGCTACGCATCCCACC

Downstream 100 bases:

>100_bases
GCACGATCACGCACAGTCCCAATGGCACACGGCGCCTGTCGCCTTTCGTCATGGCACTTGTCTTCAACTTCCTTTGGATC
AACGCATCAGAGGTCTTTCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Regulatory Protein; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein TetR Family

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLDQYQRTVVTPAFEVVEAAGAD
LTSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDADVMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMV
IFTNGLWTRSRSVSDATVLRRAVENFLSLLVERTR

Sequences:

>Translated_195_residues
MPRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLDQYQRTVVTPAFEVVEAAGAD
LTSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDADVMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMV
IFTNGLWTRSRSVSDATVLRRAVENFLSLLVERTR
>Mature_194_residues
PRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLDQYQRTVVTPAFEVVEAAGADL
TSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDADVMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMVI
FTNGLWTRSRSVSDATVLRRAVENFLSLLVERTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081833, Length=162, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21409; Mature: 21278

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
QYQRTVVTPAFEVVEAAGADLTSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHH
VMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMVIFTNGLWTRSRSVSDATVLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RAVENFLSLLVERTR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
QYQRTVVTPAFEVVEAAGADLTSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHH
VMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMVIFTNGLWTRSRSVSDATVLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RAVENFLSLLVERTR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA