Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054479
Identifier: 89054479
GI number: 89054479
Start: 1987656
End: 1987943
Strand: Direct
Name: 89054479
Synonym: Jann_1988
Alternate gene names: NA
Gene position: 1987656-1987943 (Clockwise)
Preceding gene: 89054478
Following gene: 89054480
Centisome position: 46.03
GC content: 62.85
Gene sequence:
>288_bases ATGCCTCAAGCCTATTGGATTGCCCATGTAACTGTGACCGACGACGCGGCCTATTCGAAATACGCTGCACTTGCCACCGA TGCGATCACGGCCCATGGCGGGTGTTTTCTGGCGCGCGGGGGCACGTCAATCCAGAAGGAAGGCCGGGCGCATCCGCGCA ACGTTGTGGCGGTTTTCCCCAGCCTGGAGGCGGCCAACGCCTGTTACGAGTCCGCCGCCTATCAGGAGGCGATGACCCAC GCCATCGGGGCGTCAGAGCGGGACCTTGTGCTGATCGAGGCTCCGTAA
Upstream 100 bases:
>100_bases GGCGGTGGTCGTCCTGACTTTGCGCAGGGCGGCGGCAAGGATGCGGCCAATGCAGAGGCCGCGATTGCGGCGGCGAAAAC TGTCATAGAAGGAGTGTAAG
Downstream 100 bases:
>100_bases GCTCTTGACCCCACGCGCCACGCCCTAACTACCGGTTAACGAATGGGGCGAGCATGACGACGATTTATTGGGTGCGGCGG GACTTTCGCCTGTCGGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MPQAYWIAHVTVTDDAAYSKYAALATDAITAHGGCFLARGGTSIQKEGRAHPRNVVAVFPSLEAANACYESAAYQEAMTH AIGASERDLVLIEAP
Sequences:
>Translated_95_residues MPQAYWIAHVTVTDDAAYSKYAALATDAITAHGGCFLARGGTSIQKEGRAHPRNVVAVFPSLEAANACYESAAYQEAMTH AIGASERDLVLIEAP >Mature_94_residues PQAYWIAHVTVTDDAAYSKYAALATDAITAHGGCFLARGGTSIQKEGRAHPRNVVAVFPSLEAANACYESAAYQEAMTHA IGASERDLVLIEAP
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10052; Mature: 9921
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQAYWIAHVTVTDDAAYSKYAALATDAITAHGGCFLARGGTSIQKEGRAHPRNVVAVFP CCCEEEEEEEEEECCCCHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCCCCCEEEEEEC SLEAANACYESAAYQEAMTHAIGASERDLVLIEAP CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure PQAYWIAHVTVTDDAAYSKYAALATDAITAHGGCFLARGGTSIQKEGRAHPRNVVAVFP CCEEEEEEEEEECCCCHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCCCCCEEEEEEC SLEAANACYESAAYQEAMTHAIGASERDLVLIEAP CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA