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The map label for this gene is recA

Identifier: 89054477

GI number: 89054477

Start: 1983710

End: 1984783

Strand: Direct

Name: recA

Synonym: Jann_1986

Alternate gene names: 89054477

Gene position: 1983710-1984783 (Clockwise)

Preceding gene: 89054475

Following gene: 89054478

Centisome position: 45.94

GC content: 59.12

Gene sequence:

>1074_bases
ATGGCAACGGCGAACCTCCTCGACATGACTGACCGCAAATCGGCTGACAAGCAAAAGGCCCTCGACAGCGCATTGGCGCA
GATCGAACGCCAATTCGGCAAGGGCTCCATCATGAAGCTGGGGGGCGATAATGTCCTCAAGGACATTGAAGCCACATCTA
CGGGCTCTCTCGGGCTGGATATCGCGCTCGGGATCGGTGGTCTGCCCAAGGGGCGGGTGATCGAGATTTATGGCCCGGAA
TCCTCAGGCAAGACGACGCTGACGCTGCACGCGATTGCGGAAGAGCAGAAGAAGGGCGGCGTCTGTGCGTTTGTGGACGC
CGAACACGCGCTGGACCCGCAATATGCCCGCAAACTTGGTGTGAACCTGGACGAGTTGCTGATTTCGCAGCCCGACACCG
GCGAACAGGCCCTGGAGATTGTTGATACGCTGGTGCGCTCTGGCGCGGTGAGCATGGTGGTTGTCGACAGCGTTGCGGCG
CTGACACCGAAATCGGAGCTGGAAGGCGACATGGGCGACAGCTCCGTCGGTGTTCACGCCCGTCTGATGTCCCAGGCCAT
GCGCAAGCTGACCGGCTCCATCAACCGCTCCGGCTGTATGGTGGTTTTCATCAACCAGATCCGCATGAAGATCGGCGTCA
TGTTCGGCTCACCCGAGACGACGACTGGCGGCAACGCGCTGAAGTTCTATTCCTCCGTCCGTCTGGACATCCGCCGCATT
GGCGCGATCAAAGACCGTGATGAGGTTGTGGGCAACACCACCCGCGTGAAGGTCGTGAAAAACAAGGTCGCACCGCCGTT
CAAACAGGTCGAATTTGACATCATGTATGGCGAAGGTATCTCCAAGAACGGCGAGTTGATCGACATGGGCGTGAAGGCCG
GGATCGTTGAGAAATCCGGCAGCTGGTTCTCCTACGGCGATGAACGTGTGGGGCAGGGGCGCGAAAACGCCAAGCAGTTC
ATGCGTGACAACCCTGCCATCGCCTATGAGATCGAGGATAAGATCCGCGCGGCCCACGGCCTCGACTTTGATATGGAGAA
AGACGACCCGGACATGATCCAGGACGACGATTGA

Upstream 100 bases:

>100_bases
GAGAACAAGACAAGAACATTGTAGCTGCCGGATACGAGGGACTTCTCAACCGGCCCCCATTGCCGCCGGACCCCGCGGCA
TGACATAAGGATCAAAATCC

Downstream 100 bases:

>100_bases
TCCAATCACGGATGCCAGACGCAGATGCCCGTGGTCCTGGGTGACTGCCGAAGTCTGCACCCCAGACCGGTCCGATCCCG
GGCAGAAGAATAGTCCGGAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MATANLLDMTDRKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLKDIEATSTGSLGLDIALGIGGLPKGRVIEIYGPE
SSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYARKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAA
LTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSINRSGCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GAIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKNGELIDMGVKAGIVEKSGSWFSYGDERVGQGRENAKQF
MRDNPAIAYEIEDKIRAAHGLDFDMEKDDPDMIQDDD

Sequences:

>Translated_357_residues
MATANLLDMTDRKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLKDIEATSTGSLGLDIALGIGGLPKGRVIEIYGPE
SSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYARKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAA
LTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSINRSGCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GAIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKNGELIDMGVKAGIVEKSGSWFSYGDERVGQGRENAKQF
MRDNPAIAYEIEDKIRAAHGLDFDMEKDDPDMIQDDD
>Mature_356_residues
ATANLLDMTDRKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLKDIEATSTGSLGLDIALGIGGLPKGRVIEIYGPES
SGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYARKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAAL
TPKSELEGDMGDSSVGVHARLMSQAMRKLTGSINRSGCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIG
AIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKNGELIDMGVKAGIVEKSGSWFSYGDERVGQGRENAKQFM
RDNPAIAYEIEDKIRAAHGLDFDMEKDDPDMIQDDD

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=341, Percent_Identity=66.2756598240469, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38548; Mature: 38417

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATANLLDMTDRKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLKDIEATSTGSLGLD
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCEE
IALGIGGLPKGRVIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYARKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEECCHHCCCHHHHHHHC
VNLDELLISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAALTPKSELEGDMGDSSVGVHA
CCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCHHHCCCCCCCCCCCHHH
RLMSQAMRKLTGSINRSGCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
HHHHHHHHHHHCCCCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHH
GAIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKNGELIDMGVKAGIVEKSG
CCCCCHHHHCCCCEEEEEEECCCCCCHHHEEEEEEECCCCCCCCCEEEECCEECEEECCC
SWFSYGDERVGQGRENAKQFMRDNPAIAYEIEDKIRAAHGLDFDMEKDDPDMIQDDD
CCCCCCCHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATANLLDMTDRKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLKDIEATSTGSLGLD
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCEE
IALGIGGLPKGRVIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYARKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCEEEEECCHHCCCHHHHHHHC
VNLDELLISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAALTPKSELEGDMGDSSVGVHA
CCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCHHHCCCCCCCCCCCHHH
RLMSQAMRKLTGSINRSGCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
HHHHHHHHHHHCCCCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHH
GAIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKNGELIDMGVKAGIVEKSG
CCCCCHHHHCCCCEEEEEEECCCCCCHHHEEEEEEECCCCCCCCCEEEECCEECEEECCC
SWFSYGDERVGQGRENAKQFMRDNPAIAYEIEDKIRAAHGLDFDMEKDDPDMIQDDD
CCCCCCCHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA