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The map label for this gene is aglF [H]

Identifier: 89054438

GI number: 89054438

Start: 1938785

End: 1939762

Strand: Direct

Name: aglF [H]

Synonym: Jann_1947

Alternate gene names: 89054438

Gene position: 1938785-1939762 (Clockwise)

Preceding gene: 89054437

Following gene: 89054439

Centisome position: 44.9

GC content: 57.46

Gene sequence:

>978_bases
ATGTCGCCAATTCTACAAGGCATCATCACCATTATCGTCGGTGTCGGCGGGTGTGTCGGCTACTTCTACTTCGCCAACCT
CTTCCTGGATAAGGTTCTGTTCCCGGCCAAGGGGCCGAATGCAGGGCGCAACATCAATCGCGCCAACCAGATTCGCCCCT
GGGTGTTTCTGTTTCCGGCGATCTTCGCGCTTGGCCTCTACCTGATGTATCCGGTCGTGGGCTCGTTCATCCGGTCCCTC
TATGACCGGTCGGGCGACGAGTTTGTGGGGGCGGGCAATTATATACGCCTGTTCAACAACCCCGATTTCCGCACCGCGTT
TCTGAACAACATTCTCTGGGCGCTTGTGGTGCCCGCCTTGTCCACCTTCATGGGCCTTCTGATCGCGCAGCTCACGGACC
GCCTGAAATGGGGCAACATCGCCAAGTCGATCATCTTCATGCCGATGGCGATCTCCTTCGTGGGTGCCTCGCTGATCTGG
AAGTTCGTCTACGCGCAGGACCCCGATCTGGGGATCATCAACGCGATCCGAACCTCCTTTGGCGGCGATCCGGTGGACCC
GCTTCAGATCCCGTTCTGGAACAACTTCCTGCTGATGTTCATTCTGGTGTGGATCCAGACGGGCTTTGCCATGGTGATCC
TGTCCGCCGCCCTGCGCGGTGTGCCCGAAGAAACCATCGAGGCCGCGATCATCGACGGGGCCAACCCGTTTCAGGTGTTC
TTCAAGATCAAGGTGCCGCAGATCATCGGCACCATCGTCGTGGTCTGGACCACGATTACCATCCTTGTCCTGAAGGTCTT
CGACATCGTCTACACGATGACCGGCGGCAATTACGGGACCGAGATTCTGCCGTCCTTCATGATGGATTTCATGTTCCGCG
ACGATGGGCAGGCAACGGCTGTGGCCTTCGTGATCATGCTGGTGGTTCTGCCGGTGATGATCTGGAACATTTTGCAAGCC
CGTAAGGAGATGCGTTAA

Upstream 100 bases:

>100_bases
CTCTGGCCCGGGATGTGGGCCAGGGACAAAACCCGGTCCCGCAGAGGACCCGCCCGGCGCAGCGCATGTGCCACCAGCAT
AACGGGGGGAGGGCGCGCGC

Downstream 100 bases:

>100_bases
GATGGATAACATTGCAGGACAGAAATCCGGCCTCTCCATCGTCACCAATGTCGCCGTGTTCCTTATCGTGCTGGCATGGC
TGATCCCGACCGTGGGCCTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSPILQGIITIIVGVGGCVGYFYFANLFLDKVLFPAKGPNAGRNINRANQIRPWVFLFPAIFALGLYLMYPVVGSFIRSL
YDRSGDEFVGAGNYIRLFNNPDFRTAFLNNILWALVVPALSTFMGLLIAQLTDRLKWGNIAKSIIFMPMAISFVGASLIW
KFVYAQDPDLGIINAIRTSFGGDPVDPLQIPFWNNFLLMFILVWIQTGFAMVILSAALRGVPEETIEAAIIDGANPFQVF
FKIKVPQIIGTIVVVWTTITILVLKVFDIVYTMTGGNYGTEILPSFMMDFMFRDDGQATAVAFVIMLVVLPVMIWNILQA
RKEMR

Sequences:

>Translated_325_residues
MSPILQGIITIIVGVGGCVGYFYFANLFLDKVLFPAKGPNAGRNINRANQIRPWVFLFPAIFALGLYLMYPVVGSFIRSL
YDRSGDEFVGAGNYIRLFNNPDFRTAFLNNILWALVVPALSTFMGLLIAQLTDRLKWGNIAKSIIFMPMAISFVGASLIW
KFVYAQDPDLGIINAIRTSFGGDPVDPLQIPFWNNFLLMFILVWIQTGFAMVILSAALRGVPEETIEAAIIDGANPFQVF
FKIKVPQIIGTIVVVWTTITILVLKVFDIVYTMTGGNYGTEILPSFMMDFMFRDDGQATAVAFVIMLVVLPVMIWNILQA
RKEMR
>Mature_324_residues
SPILQGIITIIVGVGGCVGYFYFANLFLDKVLFPAKGPNAGRNINRANQIRPWVFLFPAIFALGLYLMYPVVGSFIRSLY
DRSGDEFVGAGNYIRLFNNPDFRTAFLNNILWALVVPALSTFMGLLIAQLTDRLKWGNIAKSIIFMPMAISFVGASLIWK
FVYAQDPDLGIINAIRTSFGGDPVDPLQIPFWNNFLLMFILVWIQTGFAMVILSAALRGVPEETIEAAIIDGANPFQVFF
KIKVPQIIGTIVVVWTTITILVLKVFDIVYTMTGGNYGTEILPSFMMDFMFRDDGQATAVAFVIMLVVLPVMIWNILQAR
KEMR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=249, Percent_Identity=26.9076305220884, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789861, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790465, Length=267, Percent_Identity=24.7191011235955, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36326; Mature: 36195

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPILQGIITIIVGVGGCVGYFYFANLFLDKVLFPAKGPNAGRNINRANQIRPWVFLFPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHH
IFALGLYLMYPVVGSFIRSLYDRSGDEFVGAGNYIRLFNNPDFRTAFLNNILWALVVPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
STFMGLLIAQLTDRLKWGNIAKSIIFMPMAISFVGASLIWKFVYAQDPDLGIINAIRTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GGDPVDPLQIPFWNNFLLMFILVWIQTGFAMVILSAALRGVPEETIEAAIIDGANPFQVF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEE
FKIKVPQIIGTIVVVWTTITILVLKVFDIVYTMTGGNYGTEILPSFMMDFMFRDDGQATA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
VAFVIMLVVLPVMIWNILQARKEMR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPILQGIITIIVGVGGCVGYFYFANLFLDKVLFPAKGPNAGRNINRANQIRPWVFLFPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHH
IFALGLYLMYPVVGSFIRSLYDRSGDEFVGAGNYIRLFNNPDFRTAFLNNILWALVVPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
STFMGLLIAQLTDRLKWGNIAKSIIFMPMAISFVGASLIWKFVYAQDPDLGIINAIRTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GGDPVDPLQIPFWNNFLLMFILVWIQTGFAMVILSAALRGVPEETIEAAIIDGANPFQVF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEE
FKIKVPQIIGTIVVVWTTITILVLKVFDIVYTMTGGNYGTEILPSFMMDFMFRDDGQATA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
VAFVIMLVVLPVMIWNILQARKEMR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]