Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is aglG [H]
Identifier: 89054439
GI number: 89054439
Start: 1939764
End: 1940984
Strand: Direct
Name: aglG [H]
Synonym: Jann_1948
Alternate gene names: 89054439
Gene position: 1939764-1940984 (Clockwise)
Preceding gene: 89054438
Following gene: 89054440
Centisome position: 44.92
GC content: 61.43
Gene sequence:
>1221_bases ATGGATAACATTGCAGGACAGAAATCCGGCCTCTCCATCGTCACCAATGTCGCCGTGTTCCTTATCGTGCTGGCATGGCT GATCCCGACCGTGGGCCTGTTCGTCAGCTCGTTCCGGGACCGCGACCAGATCAGCGTTTCGGGCTGGTGGGAAGCGCCGT TCTCAGTAGAGCTGACCTATCGCACCCGGGCCGATGATACGCCGACCCGCGATGGCGATCTGTACGTGGCGGAAGGCAAC ATCTTCGAGACCGGAGAGGTGCAGGATCAGTTCACCTCCGGCGCGAATTCCATCGCGGCCTTCGGTCTGCGCGGCCGGGA GCCCGGGGCCTTTACAGCGGGCGAGACGGTGGACAACCGCGACGGGGGCACCGTGGTGGTGAATGCCGACGGCTCCTACG TCTACACATCGCCGGAACCCTTGGATGACAGGGGACCGAGGCTGTATTTCCTGGCGGAATCGCCGCCTGATTTCACCATG TCCAACTATGCCGAGGTCTTGACCGGTCTGGACGAGGATGAACGGGCCCAGGAAATTGCCACGGGGGCCACCTTCGGCGA GCTGTTGTTCGAGGAGGCGGGGATCTTCCGCAACTTCATCAACACGTTGACCGTGACGATCCCGGCCACGATCATCCCCA TCCTGATCGCGGCCTTTGCGGCATATGCCTTGGCCTGGATGGATTTTCCGGGGCGCGGGCTGATCATTGCCTGCGTCGTG GGCCTGCTCGTGGTGCCGCTACAACTTGCGCTGGTGCCGCTTCTCAACCTGCACAACCAGGTGGGGATCGGGCAGTCGTT TCTGGGGATATGGCTGGCCCATACCGGCTTTGGATTACCACTGGCCGTGTATTTGTTGCGAAATTACATGGTCGGCCTGC CGCGTGATATCATCGAGTCGGCCAAGGTCGACGGTGCGACGGATTTCCAGATCTTCACCAAGATCATCCTGCCGCTGTCC TTCCCGGCGCTGGCGTCGTTTGCGATCTTCCAGTTCCTGTGGACGTGGAATGACCTGCTGGTGGCCAAGGTGTTCTTGCC ATCGACCGGCGATGCGCAGGTGATGACCGTGAAGATCGCGGACGATCTTCTGGGCTCTCGCGGGGGCGATTGGGGGATTT TGGCTACGGCGGCGTTCGTGTCCATCGCGATCCCGCTGGTCGTGTTCTTCTCCATGCAGCGCTATCTGGTGCGCGGCCTT CTGGCGGGATCGGTGAAGTGA
Upstream 100 bases:
>100_bases GACGATGGGCAGGCAACGGCTGTGGCCTTCGTGATCATGCTGGTGGTTCTGCCGGTGATGATCTGGAACATTTTGCAAGC CCGTAAGGAGATGCGTTAAG
Downstream 100 bases:
>100_bases GGGGGCGTGGGATTGCGCCGCTTCGCTGTGGCGCGCGACACCTCCTCGCGGCTTCGCCCGCTCCTCGCAGCCGTTATGTG ACAGCGTTCCCGATGAGACG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDNIAGQKSGLSIVTNVAVFLIVLAWLIPTVGLFVSSFRDRDQISVSGWWEAPFSVELTYRTRADDTPTRDGDLYVAEGN IFETGEVQDQFTSGANSIAAFGLRGREPGAFTAGETVDNRDGGTVVVNADGSYVYTSPEPLDDRGPRLYFLAESPPDFTM SNYAEVLTGLDEDERAQEIATGATFGELLFEEAGIFRNFINTLTVTIPATIIPILIAAFAAYALAWMDFPGRGLIIACVV GLLVVPLQLALVPLLNLHNQVGIGQSFLGIWLAHTGFGLPLAVYLLRNYMVGLPRDIIESAKVDGATDFQIFTKIILPLS FPALASFAIFQFLWTWNDLLVAKVFLPSTGDAQVMTVKIADDLLGSRGGDWGILATAAFVSIAIPLVVFFSMQRYLVRGL LAGSVK
Sequences:
>Translated_406_residues MDNIAGQKSGLSIVTNVAVFLIVLAWLIPTVGLFVSSFRDRDQISVSGWWEAPFSVELTYRTRADDTPTRDGDLYVAEGN IFETGEVQDQFTSGANSIAAFGLRGREPGAFTAGETVDNRDGGTVVVNADGSYVYTSPEPLDDRGPRLYFLAESPPDFTM SNYAEVLTGLDEDERAQEIATGATFGELLFEEAGIFRNFINTLTVTIPATIIPILIAAFAAYALAWMDFPGRGLIIACVV GLLVVPLQLALVPLLNLHNQVGIGQSFLGIWLAHTGFGLPLAVYLLRNYMVGLPRDIIESAKVDGATDFQIFTKIILPLS FPALASFAIFQFLWTWNDLLVAKVFLPSTGDAQVMTVKIADDLLGSRGGDWGILATAAFVSIAIPLVVFFSMQRYLVRGL LAGSVK >Mature_406_residues MDNIAGQKSGLSIVTNVAVFLIVLAWLIPTVGLFVSSFRDRDQISVSGWWEAPFSVELTYRTRADDTPTRDGDLYVAEGN IFETGEVQDQFTSGANSIAAFGLRGREPGAFTAGETVDNRDGGTVVVNADGSYVYTSPEPLDDRGPRLYFLAESPPDFTM SNYAEVLTGLDEDERAQEIATGATFGELLFEEAGIFRNFINTLTVTIPATIIPILIAAFAAYALAWMDFPGRGLIIACVV GLLVVPLQLALVPLLNLHNQVGIGQSFLGIWLAHTGFGLPLAVYLLRNYMVGLPRDIIESAKVDGATDFQIFTKIILPLS FPALASFAIFQFLWTWNDLLVAKVFLPSTGDAQVMTVKIADDLLGSRGGDWGILATAAFVSIAIPLVVFFSMQRYLVRGL LAGSVK
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=188, Percent_Identity=31.3829787234043, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789860, Length=218, Percent_Identity=25.2293577981651, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790464, Length=195, Percent_Identity=33.8461538461538, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787368, Length=157, Percent_Identity=27.3885350318471, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 43966; Mature: 43966
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIAGQKSGLSIVTNVAVFLIVLAWLIPTVGLFVSSFRDRDQISVSGWWEAPFSVELTY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE RTRADDTPTRDGDLYVAEGNIFETGEVQDQFTSGANSIAAFGLRGREPGAFTAGETVDNR EECCCCCCCCCCCEEEECCCEEECCCCHHHHHCCCCHHHEECCCCCCCCCCCCCCCCCCC DGGTVVVNADGSYVYTSPEPLDDRGPRLYFLAESPPDFTMSNYAEVLTGLDEDERAQEIA CCCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH TGATFGELLFEEAGIFRNFINTLTVTIPATIIPILIAAFAAYALAWMDFPGRGLIIACVV HCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLLVVPLQLALVPLLNLHNQVGIGQSFLGIWLAHTGFGLPLAVYLLRNYMVGLPRDIIES HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH AKVDGATDFQIFTKIILPLSFPALASFAIFQFLWTWNDLLVAKVFLPSTGDAQVMTVKIA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEH DDLLGSRGGDWGILATAAFVSIAIPLVVFFSMQRYLVRGLLAGSVK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDNIAGQKSGLSIVTNVAVFLIVLAWLIPTVGLFVSSFRDRDQISVSGWWEAPFSVELTY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEE RTRADDTPTRDGDLYVAEGNIFETGEVQDQFTSGANSIAAFGLRGREPGAFTAGETVDNR EECCCCCCCCCCCEEEECCCEEECCCCHHHHHCCCCHHHEECCCCCCCCCCCCCCCCCCC DGGTVVVNADGSYVYTSPEPLDDRGPRLYFLAESPPDFTMSNYAEVLTGLDEDERAQEIA CCCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH TGATFGELLFEEAGIFRNFINTLTVTIPATIIPILIAAFAAYALAWMDFPGRGLIIACVV HCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLLVVPLQLALVPLLNLHNQVGIGQSFLGIWLAHTGFGLPLAVYLLRNYMVGLPRDIIES HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH AKVDGATDFQIFTKIILPLSFPALASFAIFQFLWTWNDLLVAKVFLPSTGDAQVMTVKIA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEH DDLLGSRGGDWGILATAAFVSIAIPLVVFFSMQRYLVRGLLAGSVK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]