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The map label for this gene is fadB1 [H]

Identifier: 89054399

GI number: 89054399

Start: 1896759

End: 1897799

Strand: Reverse

Name: fadB1 [H]

Synonym: Jann_1908

Alternate gene names: 89054399

Gene position: 1897799-1896759 (Counterclockwise)

Preceding gene: 89054400

Following gene: 89054398

Centisome position: 43.95

GC content: 64.84

Gene sequence:

>1041_bases
ATGGACGTCGAGATCCGAATTGAAGGGCGCGCGGGGCGGATCACGCTGAACCGGCCCAAGGCGCTGAACGCGGTGACCTA
TCAGATGTGTCTGGCGATTGAGGCGGCCCTGGATGCCTGGGCCGGGGACGACGCTGTGGACCTGGTGATGATCGACGCCG
CTGGCGAGCGGGCCTTCAGCGCGGGCGGCGATATTCAAGAGATGTATGACACCGGCATGGCGGGTGACTTCGCCTATGGT
CGCCGGTTCTGGGCCGACGAATACCGGATGAACGCCAAGATGTTCGCGTTTCCGAAGCCTGTCGTGACGTTTTTGCAGGG
CTTCACCATGGGTGGCGGCGTGGGTGTCGGCTGCCACGGGTCGCACCGGATCGTGTGCGAAAGCTCAACGATCGCGATGC
CGGAATGCGGGATCGGGCTGGTGCCGGATGTCGGTGGCACGCTTCTGTTGGCGCGCGCGCCGGGGCGGTTGGGGGAATAC
CTGGGCGTGACGGCGGCGCGGATGGGTCCGGGCGACGCCATCTTCGCGGAGTTTGCTGACTATTATGTGCCTGAGGCGGA
GTGGGCAGCGTTGAAAACTGACCTCCTGACCGGGGACTGCGACGCCGTCGACCGAGCCGCGAAGACGCCCCCTCCCAGCA
CATTGGCCGCGCAAAGGAGGGCGATTGACCACCTCTTTGGCGGCGAGACCCTGCGCGATCTGCTGGTGGATCTGGCCCAT
GCGCCGGACGACATGGCGGACTTTGTGGCGGCGACGCACAAGATGATGGGCCGAAACGCGCCGCTGTCCATGGCCTGCGC
CATCGAGTTGGTGCACCGCGCCCGGACCCGAGACGATATGGAACAGGCCCTGCGCAATGAGTATCGCTTCACCGCGCGGT
CGATGGAGCACGGGGATTTTCTGGAAGGCATCCGGGCCGCAATTATCGACAAGGACCGTAAGCCGGTGTGGAAGCACAAG
GCGCCCGGCGATGTGACATTGGCTGAGGTGGCGGCGATGTTGCGCCCGCTGGGGCCGGATGAATGGAGGATGAGCAAATG
A

Upstream 100 bases:

>100_bases
TCGTGTCGCGGCAGATGCTGGCGGATCGCGGGTGAGGTCTGTGCGCGGGGCTGGCTGCGGGATTGAGTTGTATTTGCCAA
GATGAAGGAGGGGAGCGGGA

Downstream 100 bases:

>100_bases
AAATCGGGTTTATCGGCCTGGGGAACATGGGCGCACCGATGGCGGCCAATCTGGCCGCTGCGGGCCATGAGGTAGTGGGG
TTCGATACGGTGGCGGACAC

Product: enoyl-CoA hydratase/isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDVEIRIEGRAGRITLNRPKALNAVTYQMCLAIEAALDAWAGDDAVDLVMIDAAGERAFSAGGDIQEMYDTGMAGDFAYG
RRFWADEYRMNAKMFAFPKPVVTFLQGFTMGGGVGVGCHGSHRIVCESSTIAMPECGIGLVPDVGGTLLLARAPGRLGEY
LGVTAARMGPGDAIFAEFADYYVPEAEWAALKTDLLTGDCDAVDRAAKTPPPSTLAAQRRAIDHLFGGETLRDLLVDLAH
APDDMADFVAATHKMMGRNAPLSMACAIELVHRARTRDDMEQALRNEYRFTARSMEHGDFLEGIRAAIIDKDRKPVWKHK
APGDVTLAEVAAMLRPLGPDEWRMSK

Sequences:

>Translated_346_residues
MDVEIRIEGRAGRITLNRPKALNAVTYQMCLAIEAALDAWAGDDAVDLVMIDAAGERAFSAGGDIQEMYDTGMAGDFAYG
RRFWADEYRMNAKMFAFPKPVVTFLQGFTMGGGVGVGCHGSHRIVCESSTIAMPECGIGLVPDVGGTLLLARAPGRLGEY
LGVTAARMGPGDAIFAEFADYYVPEAEWAALKTDLLTGDCDAVDRAAKTPPPSTLAAQRRAIDHLFGGETLRDLLVDLAH
APDDMADFVAATHKMMGRNAPLSMACAIELVHRARTRDDMEQALRNEYRFTARSMEHGDFLEGIRAAIIDKDRKPVWKHK
APGDVTLAEVAAMLRPLGPDEWRMSK
>Mature_346_residues
MDVEIRIEGRAGRITLNRPKALNAVTYQMCLAIEAALDAWAGDDAVDLVMIDAAGERAFSAGGDIQEMYDTGMAGDFAYG
RRFWADEYRMNAKMFAFPKPVVTFLQGFTMGGGVGVGCHGSHRIVCESSTIAMPECGIGLVPDVGGTLLLARAPGRLGEY
LGVTAARMGPGDAIFAEFADYYVPEAEWAALKTDLLTGDCDAVDRAAKTPPPSTLAAQRRAIDHLFGGETLRDLLVDLAH
APDDMADFVAATHKMMGRNAPLSMACAIELVHRARTRDDMEQALRNEYRFTARSMEHGDFLEGIRAAIIDKDRKPVWKHK
APGDVTLAEVAAMLRPLGPDEWRMSK

Specific function: Could possibly oxidize fatty acids using specific components [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI37594471, Length=355, Percent_Identity=31.5492957746479, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI37594469, Length=306, Percent_Identity=31.0457516339869, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI194097323, Length=174, Percent_Identity=31.6091954022989, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1787659, Length=215, Percent_Identity=26.9767441860465, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI221142681, Length=175, Percent_Identity=29.7142857142857, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25144157, Length=351, Percent_Identity=32.7635327635328, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI25144160, Length=351, Percent_Identity=32.7635327635328, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17554946, Length=143, Percent_Identity=34.965034965035, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320241, Length=357, Percent_Identity=28.8515406162465, Blast_Score=139, Evalue=7e-34,
Organism=Drosophila melanogaster, GI28571730, Length=335, Percent_Identity=33.7313432835821, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI28571729, Length=335, Percent_Identity=33.7313432835821, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=27.0161290322581, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=27.0161290322581, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.17 [H]

Molecular weight: Translated: 37612; Mature: 37612

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVEIRIEGRAGRITLNRPKALNAVTYQMCLAIEAALDAWAGDDAVDLVMIDAAGERAFS
CCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHC
AGGDIQEMYDTGMAGDFAYGRRFWADEYRMNAKMFAFPKPVVTFLQGFTMGGGVGVGCHG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCEEECCCC
SHRIVCESSTIAMPECGIGLVPDVGGTLLLARAPGRLGEYLGVTAARMGPGDAIFAEFAD
CCEEEECCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHCCCCCHHHHHHHHH
YYVPEAEWAALKTDLLTGDCDAVDRAAKTPPPSTLAAQRRAIDHLFGGETLRDLLVDLAH
HHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
APDDMADFVAATHKMMGRNAPLSMACAIELVHRARTRDDMEQALRNEYRFTARSMEHGDF
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH
LEGIRAAIIDKDRKPVWKHKAPGDVTLAEVAAMLRPLGPDEWRMSK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDVEIRIEGRAGRITLNRPKALNAVTYQMCLAIEAALDAWAGDDAVDLVMIDAAGERAFS
CCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHC
AGGDIQEMYDTGMAGDFAYGRRFWADEYRMNAKMFAFPKPVVTFLQGFTMGGGVGVGCHG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCEEECCCC
SHRIVCESSTIAMPECGIGLVPDVGGTLLLARAPGRLGEYLGVTAARMGPGDAIFAEFAD
CCEEEECCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHCCCCCHHHHHHHHH
YYVPEAEWAALKTDLLTGDCDAVDRAAKTPPPSTLAAQRRAIDHLFGGETLRDLLVDLAH
HHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
APDDMADFVAATHKMMGRNAPLSMACAIELVHRARTRDDMEQALRNEYRFTARSMEHGDF
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHH
LEGIRAAIIDKDRKPVWKHKAPGDVTLAEVAAMLRPLGPDEWRMSK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751302; 11481430 [H]