Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054369
Identifier: 89054369
GI number: 89054369
Start: 1866800
End: 1867333
Strand: Reverse
Name: 89054369
Synonym: Jann_1878
Alternate gene names: NA
Gene position: 1867333-1866800 (Counterclockwise)
Preceding gene: 89054370
Following gene: 89054368
Centisome position: 43.25
GC content: 63.86
Gene sequence:
>534_bases ATGAAACGGCAGTCCAGCCCTGTGCTGATTGGCCTGGGGTTTTTGGGACTGGGTGTCGCGCTGCTGGCCTTCGCGGCGGT TCTGACCGGTCATGTCACGAAGGAAACCCGCATCGGGCGCGGGCTTTTGGAAACGGGCGAGGTCACGCGAGCCCTTCTCG TCACCGCAGATCGCATGGAACGCACCCAATGTTCCCGCAGCCAGCGCAGGATTTGCACGGCGGCCGACAATTTCATCGGC ACGGTGGTGTATCAGGTCCCGGGACGGCGCTCGGGCGCCGATATCCGCCTGACGCCCGATGAGTTTGAGGCCTATATCGC GGGTGAGGAAGTGTTCATCGACCTCATCTACCTGCCCGCCTTTCCGACCCATGTCGAACGCATCCCGGGCGCGCGCCTCG CAAACGCCGGTGCTGACACCCTGACCATCTATGTTATGGCGGCCTTCGGGCTGACCCTCGCCCTTATCGGCGGCGTTGCC ATGCGTATCGCCCGCAAACAAACTGCGCGTCCCTCGACAGGCCCGCAGGCGTGA
Upstream 100 bases:
>100_bases TCTGGCTCCAAAAGATGAGTTGTATTGGCCCAGATGAAGGAGAAGCGGTGCGCCTGTGCCCTCACCCAGGACGCCCGGGC GCATCGGAGCATTCGTGCGC
Downstream 100 bases:
>100_bases CCTAAGAACCATGTCCATGAGCACCATTCTAGACAAGATCAAAGCCTACAAGCTGGAGGAAGTGGCCGCCGCAAAGGCCG CCCGCCCCCGGTCCGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKRQSSPVLIGLGFLGLGVALLAFAAVLTGHVTKETRIGRGLLETGEVTRALLVTADRMERTQCSRSQRRICTAADNFIG TVVYQVPGRRSGADIRLTPDEFEAYIAGEEVFIDLIYLPAFPTHVERIPGARLANAGADTLTIYVMAAFGLTLALIGGVA MRIARKQTARPSTGPQA
Sequences:
>Translated_177_residues MKRQSSPVLIGLGFLGLGVALLAFAAVLTGHVTKETRIGRGLLETGEVTRALLVTADRMERTQCSRSQRRICTAADNFIG TVVYQVPGRRSGADIRLTPDEFEAYIAGEEVFIDLIYLPAFPTHVERIPGARLANAGADTLTIYVMAAFGLTLALIGGVA MRIARKQTARPSTGPQA >Mature_177_residues MKRQSSPVLIGLGFLGLGVALLAFAAVLTGHVTKETRIGRGLLETGEVTRALLVTADRMERTQCSRSQRRICTAADNFIG TVVYQVPGRRSGADIRLTPDEFEAYIAGEEVFIDLIYLPAFPTHVERIPGARLANAGADTLTIYVMAAFGLTLALIGGVA MRIARKQTARPSTGPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18971; Mature: 18971
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQSSPVLIGLGFLGLGVALLAFAAVLTGHVTKETRIGRGLLETGEVTRALLVTADRME CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH RTQCSRSQRRICTAADNFIGTVVYQVPGRRSGADIRLTPDEFEAYIAGEEVFIDLIYLPA HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECHHHHHHHCCCCHHEEEEEECCC FPTHVERIPGARLANAGADTLTIYVMAAFGLTLALIGGVAMRIARKQTARPSTGPQA CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKRQSSPVLIGLGFLGLGVALLAFAAVLTGHVTKETRIGRGLLETGEVTRALLVTADRME CCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH RTQCSRSQRRICTAADNFIGTVVYQVPGRRSGADIRLTPDEFEAYIAGEEVFIDLIYLPA HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECHHHHHHHCCCCHHEEEEEECCC FPTHVERIPGARLANAGADTLTIYVMAAFGLTLALIGGVAMRIARKQTARPSTGPQA CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA