Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054322
Identifier: 89054322
GI number: 89054322
Start: 1817600
End: 1817902
Strand: Reverse
Name: 89054322
Synonym: Jann_1831
Alternate gene names: NA
Gene position: 1817902-1817600 (Counterclockwise)
Preceding gene: 89054323
Following gene: 89054316
Centisome position: 42.1
GC content: 63.04
Gene sequence:
>303_bases GTGTCGCACGGCGAAGTTGTCGACACATTGGGGAGACACAGGATACCTGTTTCGATACAAAGAGCCGCGCGTATCGGTCG AAACCTTCGAAGCCACGCGGGCGGGCCACAGCAATCGCCCTCACCGTGCTGCGCGATGCGCCCGGTCTTGCTGCTGGGTG ACCCCCCGAGTGCCGCGCCCGCCGAGAACAAGGCCGCTGTGCAAACGGCTGCGGAAGAATTGAACCAAGCCCGGTTGACC ATGATCATTCCGCAGCCCCGGGCGGCAGCAGAAAACGGCTGGCCGCATCATCGGAATGGATGA
Upstream 100 bases:
>100_bases CAGTTGACTGTTAATCAATTTGTCGTAGGTTCGATCCCTACCGCCGGAGCCAGTTTTCCCTTTTAGAATAGCGTGCCAAC AGCATGACGGTCTGCGACTG
Downstream 100 bases:
>100_bases GGGAGAGATCGTGGCCACCGGCATCCAGAATGCACTGGTCGCCGCGCGCAGCCCTCAGGGCCGTCTCGCGCGGCTGCAAT TCATTGGCTAGCGCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSHGEVVDTLGRHRIPVSIQRAARIGRNLRSHAGGPQQSPSPCCAMRPVLLLGDPPSAAPAENKAAVQTAAEELNQARLT MIIPQPRAAAENGWPHHRNG
Sequences:
>Translated_100_residues MSHGEVVDTLGRHRIPVSIQRAARIGRNLRSHAGGPQQSPSPCCAMRPVLLLGDPPSAAPAENKAAVQTAAEELNQARLT MIIPQPRAAAENGWPHHRNG >Mature_99_residues SHGEVVDTLGRHRIPVSIQRAARIGRNLRSHAGGPQQSPSPCCAMRPVLLLGDPPSAAPAENKAAVQTAAEELNQARLTM IIPQPRAAAENGWPHHRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10665; Mature: 10534
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGEVVDTLGRHRIPVSIQRAARIGRNLRSHAGGPQQSPSPCCAMRPVLLLGDPPSAAP CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC AENKAAVQTAAEELNQARLTMIIPQPRAAAENGWPHHRNG CCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHGEVVDTLGRHRIPVSIQRAARIGRNLRSHAGGPQQSPSPCCAMRPVLLLGDPPSAAP CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC AENKAAVQTAAEELNQARLTMIIPQPRAAAENGWPHHRNG CCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA