Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is ycbL [C]
Identifier: 89054323
GI number: 89054323
Start: 1818084
End: 1818968
Strand: Reverse
Name: ycbL [C]
Synonym: Jann_1832
Alternate gene names: 89054323
Gene position: 1818968-1818084 (Counterclockwise)
Preceding gene: 89054326
Following gene: 89054322
Centisome position: 42.13
GC content: 66.33
Gene sequence:
>885_bases ATGCAAAGCGAAACGAGACATCCGTCGTCGACGCACCTGGCCCCGGACCTGCGCCGCATCACGGCCCCCAACCCATCCCC CATGACCTTCACCGGCACGCAGACCTATATTCTGGGCCAAGGGGAGGTCAGTGTGATCGACCCCGGCCCGGCGGTGCCAC AGCATATGCACGCGATCCTGGGCGCGTTGCAGCCCGGGGAGAGTGTCGCGCGGATCCTTGTGACCCACTCGCATCTTGAT CATTCCCCCCTCGCCCGCCCCCTGGCCCAGGCCACGGGCGCACCGATTTTTGCCGCCGGACCATCCGATTGGGGCCGCAG TGCGGTGATGACAGCACTGGGTGACGCAGTGGGTGGCGGCGAAGGCATTGATCCGGACTTCGCACCGGACGAACGGATCA GGGGCGGCGATATCATTGAGGGCATCGAGGTGCTGGAGACCCCCGGCCACATGGCCAATCACCTCAGCTTTGTCTGGGGC GATGCGTTGTTCTCGGGCGATCTGGCAATGGGATGGTCCACGTCGCTGGTCTCCCCTCCCGACGGCGACATGACGGCCTT CTTCGCGTCGTTGGAGATGTTGCGGGCCCGCCAGGACCGGATCTATTACCCCGGCCACGGAGAGCCGGTGACCCATCCCC AGGCCCGCTGTGCCGAGCTGATCGCCCACAGGCGCGGACGTGAGGCCCAGATCCTTGCGGCTTTGGCGCAGATCGGCCCC GCCAGCGCCGACACCCTCGCGCGTCATATCTACACCGACGTGGCCGCCGCCCTGCTGCCCGCCGCCGCCCGCAACGTTCT GGCTCACCTCATCGACCTCCGCACACGCGCGCAGATCACTACTTCCGACCCTCTCCACAAAGACGCACTTTTCGCGTGTG AGTGA
Upstream 100 bases:
>100_bases TCAGGATCAGGGCCGCACGCCCGTAAAGGCCACGCGGCAGAAATTGCTTGATCCAGGTCGACGGTGTCATGGCCATAACC TACGCGAGGGCGCACACTGC
Downstream 100 bases:
>100_bases ACTTTTCGGGATTCCCCCACTGGACGGCCCAAAAGACCCTTGCTATATCGCGCCTAGTTCCGGCGTAGCTCAGCGGTAGA GCAGTTGACTGTTAATCAAT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase Family Protein; Beta-Lactamase; Beta-Lactamase-Like Protein; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase Protein; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Family Hydrolase; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQSETRHPSSTHLAPDLRRITAPNPSPMTFTGTQTYILGQGEVSVIDPGPAVPQHMHAILGALQPGESVARILVTHSHLD HSPLARPLAQATGAPIFAAGPSDWGRSAVMTALGDAVGGGEGIDPDFAPDERIRGGDIIEGIEVLETPGHMANHLSFVWG DALFSGDLAMGWSTSLVSPPDGDMTAFFASLEMLRARQDRIYYPGHGEPVTHPQARCAELIAHRRGREAQILAALAQIGP ASADTLARHIYTDVAAALLPAAARNVLAHLIDLRTRAQITTSDPLHKDALFACE
Sequences:
>Translated_294_residues MQSETRHPSSTHLAPDLRRITAPNPSPMTFTGTQTYILGQGEVSVIDPGPAVPQHMHAILGALQPGESVARILVTHSHLD HSPLARPLAQATGAPIFAAGPSDWGRSAVMTALGDAVGGGEGIDPDFAPDERIRGGDIIEGIEVLETPGHMANHLSFVWG DALFSGDLAMGWSTSLVSPPDGDMTAFFASLEMLRARQDRIYYPGHGEPVTHPQARCAELIAHRRGREAQILAALAQIGP ASADTLARHIYTDVAAALLPAAARNVLAHLIDLRTRAQITTSDPLHKDALFACE >Mature_294_residues MQSETRHPSSTHLAPDLRRITAPNPSPMTFTGTQTYILGQGEVSVIDPGPAVPQHMHAILGALQPGESVARILVTHSHLD HSPLARPLAQATGAPIFAAGPSDWGRSAVMTALGDAVGGGEGIDPDFAPDERIRGGDIIEGIEVLETPGHMANHLSFVWG DALFSGDLAMGWSTSLVSPPDGDMTAFFASLEMLRARQDRIYYPGHGEPVTHPQARCAELIAHRRGREAQILAALAQIGP ASADTLARHIYTDVAAALLPAAARNVLAHLIDLRTRAQITTSDPLHKDALFACE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7705793, Length=262, Percent_Identity=30.9160305343511, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI20129357, Length=293, Percent_Identity=29.6928327645051, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31215; Mature: 31215
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSETRHPSSTHLAPDLRRITAPNPSPMTFTGTQTYILGQGEVSVIDPGPAVPQHMHAIL CCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCEEEEEECCCEEEECCCCCCHHHHHHHH GALQPGESVARILVTHSHLDHSPLARPLAQATGAPIFAAGPSDWGRSAVMTALGDAVGGG HCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCC EGIDPDFAPDERIRGGDIIEGIEVLETPGHMANHLSFVWGDALFSGDLAMGWSTSLVSPP CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DGDMTAFFASLEMLRARQDRIYYPGHGEPVTHPQARCAELIAHRRGREAQILAALAQIGP CCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC ASADTLARHIYTDVAAALLPAAARNVLAHLIDLRTRAQITTSDPLHKDALFACE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCEECC >Mature Secondary Structure MQSETRHPSSTHLAPDLRRITAPNPSPMTFTGTQTYILGQGEVSVIDPGPAVPQHMHAIL CCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCEEEEEECCCEEEECCCCCCHHHHHHHH GALQPGESVARILVTHSHLDHSPLARPLAQATGAPIFAAGPSDWGRSAVMTALGDAVGGG HCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCC EGIDPDFAPDERIRGGDIIEGIEVLETPGHMANHLSFVWGDALFSGDLAMGWSTSLVSPP CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DGDMTAFFASLEMLRARQDRIYYPGHGEPVTHPQARCAELIAHRRGREAQILAALAQIGP CCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC ASADTLARHIYTDVAAALLPAAARNVLAHLIDLRTRAQITTSDPLHKDALFACE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA