Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is yjgQ [C]
Identifier: 89054304
GI number: 89054304
Start: 1802923
End: 1804017
Strand: Reverse
Name: yjgQ [C]
Synonym: Jann_1813
Alternate gene names: 89054304
Gene position: 1804017-1802923 (Counterclockwise)
Preceding gene: 89054305
Following gene: 89054303
Centisome position: 41.78
GC content: 63.47
Gene sequence:
>1095_bases ATGATCCTGCACCTCTACATCGCGCGGCGCTTTCTTGTGTCCTTCGGGATCGTTCTGGCGGTTTTCATGGCCATTCTGTT GCCCATCGACATGGCGGACCAATTGCGGCGCATCGGGTCGGACCAGGGCTTTTCCGCCGTGCTGCAACTGGCGCTCCTGA ACCTGCCGCGCAGCATAACCGGGCTGATGCCGCTCTTCGTCATGCTGGCCACGCTGGTGTTGTTTCTGGGCCTGGCCCGC ACGTCGGAATTGGTCGTCGTGCGCGCAGCCGGTCGGTCCGCCCTCAAATCCGCCGCATCGCCGGTGATCGTGGCGCTGAT CATCGGCGGGTTGTCGCTATTGATCCTGAACCCCCTCGTGGCAACCACGGCCCGGCAATACGACCTCACGCTCGCCCGTC TGTCGGGGCTGGAGAGCCGATCCGTCTCTGTCACCGGAGAGGGCTTTTGGCTGCGCCAGGGAACCGGGAGTGAACAGACG GTGATCCGCGCCTCGGCCACCAATTCCGATGGCACGCATTTGTTCGACGCGTCATTCTTCACCTTCGACGCGGACGGCGC ATTGCTGGAGCGGATGGACGCCCGGGAGGCCGTGTTGGCGCGCGCGGCCTGGACCCTGACGGATGTGAAGCGCTGGCCCT TGGCCCAATCTGACAATGCGGAGGCCGATGCAGAACTGTTCCCGACCCTCACCCTGCCCTCCACACTGACGCCTGAGCAG ATCCGCGACAGCTTCGGCAACCCCGAGACGGTGCCGATCTTTGAGCTTCCGGGATTCATCCGGCAACTCAACGACGCGGG CTTTGCCGCCCTGCAACATCGCACCTGGTTTCAGATGCAGCTATCCTCTCCGCTTCTGCTGGCGGCCATGGTGCTGATTG GCGCAGGGTTCACCATGCGCCACACGCGGTTCGGCAAAACCGGGGTCATGGTCCTGGGCGCGATCCTTCTGGGCTTCGGC GTGGTCTTCCTGCGCCGATTTGCGGAGGTTCTGGGCGAAACCGGCCAACTGGCCGCATCCCTGGTGGCCTGGACCCCTCC GATTGCCGCAATTCTCTTGGCGATTGGCTTTTTATTGCATACGGAGGATGGGTGA
Upstream 100 bases:
>100_bases GGCCCATGGCCTATGCGCAACCCGCGTCTGCGGCGGCCGTGGCGGCCATCATGGCCACGCTTGCCATGCGCCGTTCGACC CGGTGGAGGCGCGTTCCCGC
Downstream 100 bases:
>100_bases CCCGCCGTCGTTTGCATATCGCCGCGGTCGTCCTGACCGCCCTTGTCAGCTTCACCTCTCCGGGGGCGGCTCAAACGACT GCGCCTGCGACCCTGATCGC
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP; Transmembrane Protein; ABC Transporter Membrane Protein; Permeases; Transporter YjgP/YjgQ; Permease Protein
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSDQGFSAVLQLALLNLPRSITGLMPLFVMLATLVLFLGLAR TSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLVATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQT VIRASATNSDGTHLFDASFFTFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ IRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIGAGFTMRHTRFGKTGVMVLGAILLGFG VVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFLLHTEDG
Sequences:
>Translated_364_residues MILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSDQGFSAVLQLALLNLPRSITGLMPLFVMLATLVLFLGLAR TSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLVATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQT VIRASATNSDGTHLFDASFFTFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ IRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIGAGFTMRHTRFGKTGVMVLGAILLGFG VVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFLLHTEDG >Mature_364_residues MILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSDQGFSAVLQLALLNLPRSITGLMPLFVMLATLVLFLGLAR TSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLVATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQT VIRASATNSDGTHLFDASFFTFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ IRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIGAGFTMRHTRFGKTGVMVLGAILLGFG VVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFLLHTEDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39262; Mature: 39262
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSDQGFSAVLQLALLNLPRSIT CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH GLMPLFVMLATLVLFLGLARTSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLV HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQTVIRASATNSDGTHLFDASFF HHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECEEE TFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEECCCCCCCHHH IRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIGAGFTMR HHHHCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCEE HTRFGKTGVMVLGAILLGFGVVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFLLH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHC TEDG CCCC >Mature Secondary Structure MILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIGSDQGFSAVLQLALLNLPRSIT CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH GLMPLFVMLATLVLFLGLARTSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPLV HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQTVIRASATNSDGTHLFDASFF HHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECEEE TFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPEQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEECCCCCCCHHH IRDSFGNPETVPIFELPGFIRQLNDAGFAALQHRTWFQMQLSSPLLLAAMVLIGAGFTMR HHHHCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCEE HTRFGKTGVMVLGAILLGFGVVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFLLH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHC TEDG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA