Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yqiK [H]
Identifier: 89054285
GI number: 89054285
Start: 1781787
End: 1783469
Strand: Reverse
Name: yqiK [H]
Synonym: Jann_1794
Alternate gene names: 89054285
Gene position: 1783469-1781787 (Counterclockwise)
Preceding gene: 89054286
Following gene: 89054283
Centisome position: 41.3
GC content: 62.63
Gene sequence:
>1683_bases ATGGAATTTATTCTGATTATCGTCGCCGCCGTCATTGGCTTTCTGGTCTTTGCGGGCCTGATCATCGGGCGGCTCTACAA GCGCACGACGCGAGAGCTGTCGTTGGTGAAGACGGGTGCCGGTGGCAAGAAGGTGATCATGGATGGCGGCACGTTGGTGA TCCCGCTTCTTCATGAAGTGTCGCCCGTCAACATGAAGACCCTGCGCCTGGAGGTTCGCCGCACCGGAGAAGGCGCGCTG ATCACGCAGGACCGGATGCGTGTGGACGTGGGCGTGGAGTTTTACGTTTCTGTCATGGCAACTGACGAGGGGATCGCGCG GGCGGCCCAAACGCTCGGTGACCGGACGTTTTATGTCGATCAGCTGCGCGAGATGATTGAGGGCAAACTGATCGACGGCC TGCGAGCCGTGGCCGCGAAGATGACGATGGACAGTCTGCATGAAAACCGCTCGGACTTTGTGCAGCAGGTGCAGAATGCG ATTTCTGAAGATCTGTTGAAGAACGGTTTGTCGCTGGAATCGGTCTCGCTCACCGCGCTGGACCAGACACCCTTCGAGAG CCTCGATGAAAACAACGCGTTCAACGCCGTCGGCATGCGCAAACTGGCCGAGGTGATTGCAAAATCCAAGAAAGAACGTG CCGAGATTGACGCCGATGCCGAAGTGGCTGTGCGCCGCGCGGCCATGGAGGGGGAGCGCCAGAAGCTCTCCATCCAGCAG GATGAAGAGCAGGCGGCGATCGCTCAGGTGCAAGAGATCGAGACGATGAAAGCCGCCCAGGAGATGGAGATTTCGCTGCG TCGCGAGGATTCGATGCGCGAGAGTGAACGCGCCCGGATTGCCCGCGAAGAGCAGGTGCGCTCAGCCGAGATTAACCGCG AGCGCAATATCCGCGAGGCAGAGATCTCCAAGGAGCGGGAGCTGGAAGTGGCGGAGCAAGAGCGCCAGATCATCATCCAG CAGAAGTCCGAGGAAGAGAGCCGCGCGCGGGCGTCGGCTGACCTGGCAAGGGCTGAGGCGACAAAGGCCACGGAAGCTGT GGCGACCGCCCGAGAGGTGGCAGAGGCCGAGCGTGTGAAGCAGATCGCGCTGATTGAGGCGGCGCGGGAAGCCGAGCGCG AGGCGACCAAGATCCGCCTTGCGGCTGCCGCCGAGAAAGATGCGGCCCAGGACCGGGCCGACGCCCGTCGCGAGGAAGCA CAGGCCGAGGCCGATGCCATCTCCATCCGCGCAGACGCCAAGAAAAAGGACATGCTGGCAGAGGCCGAAGGGACACGTGC GATCACCGAGGCCGAAAACGCGCTGTCGGAGCAGATCGTCGGCATGAAGATCGACATGGCCCGGATTGAGGCGATCCCTG GCATCATGGAGCAGATGGTCAAGCCGGTAGAGAAGATCGGAGAGATCAAGATCCATCAGGTCGGCGGTCTGGGTGGCGGC CAAGGTGGCGGCGGCGCAGGTGGATCTGGCGGCGACAAGCCCGTGGTAAACCAGGCGCTGGATTCCATCATGGGCATGGC GGTACAGATGCCGGCCCTGCGGAAGTTGGGCGACGAGCTGGGGCTGAGCCTGGAAAGCGGTGTGGAAGGTCTGGCCGAAA GCGCGCTGACAGCCCGGCCCAACAACGCACCTGCGGTGGAAGCGCCCAAGCCAGCCGCGGACCCCGCCTCGCCCGCAGAG TAA
Upstream 100 bases:
>100_bases GGTTCTTGTTCTGCGCCACCGCCCCACCGGCGGGTTTCGTCTGATCGCGCTCTGAGGCGGCCCCTTCGCCCCAAGCGCCC TATTTGAAAGGACTAACTCC
Downstream 100 bases:
>100_bases GGCCGCGATGGGCGTCGTTTGATCCGGGGCAAAGACCCTGGCCAGAGGGCGGCCCATCCACCGATATCAGCGCGGGCATA GCCCGCACAGCCATCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE
Sequences:
>Translated_560_residues MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE >Mature_560_residues MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=530, Percent_Identity=43.2075471698113, Blast_Score=381, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 60721; Mature: 60721
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEHHHCC SPVNMKTLRLEVRRTGEGALITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVD CCCCCEEEEEEEEECCCCCEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHCCCHHHHH QLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNAISEDLLKNGLSLESVSLTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC DQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCC DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EISKERELEVAEQERQIIIQQKSEEESRARASADLARAEATKATEAVATAREVAEAERVK HHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEAQAEADAISIRADAKKKDMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH EAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG HCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC NNAPAVEAPKPAADPASPAE CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEHHHCC SPVNMKTLRLEVRRTGEGALITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVD CCCCCEEEEEEEEECCCCCEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHCCCHHHHH QLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNAISEDLLKNGLSLESVSLTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC DQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCC DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EISKERELEVAEQERQIIIQQKSEEESRARASADLARAEATKATEAVATAREVAEAERVK HHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEAQAEADAISIRADAKKKDMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH EAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG HCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC NNAPAVEAPKPAADPASPAE CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]