Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is fpr [H]
Identifier: 89054261
GI number: 89054261
Start: 1758825
End: 1759685
Strand: Reverse
Name: fpr [H]
Synonym: Jann_1770
Alternate gene names: 89054261
Gene position: 1759685-1758825 (Counterclockwise)
Preceding gene: 89054262
Following gene: 89054259
Centisome position: 40.75
GC content: 60.98
Gene sequence:
>861_bases ATGATGACCGAGCAAACACCCGTGACCCAGACCGACGCCGCGCCTGTGAAGGCGACCCCCACCCTGCCCGATGCGCAAAC CGTGACAGAGGTTAAGCATTACACCGACCGTTTGTTCAGCTTCCGCTGTACGCGGCCCGCCTCCCTGCGGTTCCGGTCCG GTGAGTTTGTGATGATCGGCCTGATGGGCGAACCGCACCCCGAGACGGGCAAGCAGAAGCCGCTGCTGCGCGCCTATTCC ATCGCCTCGCCGTCTTGGGATGAGGAATTGGAGTTCTACTCCATCAAGGTGCCCGACGGTCCGCTGACATCCCGCCTCCA GCACATCCAGCCCGGCGAACAGATCATCCTGCGTCCCAAGCCTGTGGGCACGCTGGTCCACGACGCGCTTCTGCCGGGCA AACGCCTGTGGTTCTTTGCGACCGGCACCGGGTTTGCCCCCTTCGCCAGCCTCCTGCGCGAGCCGCAGACCTATGAGGAT TATGACGAGATCATCATCACCCACACCTGCCGCGAAGTCGGGGAGCTGACCTATGGCCGCGACCTGATCGCGGCGTTGCA ACATGATGAGTTGCTCAATGAGGTGATCGGGGACGGCTTCTGGAAGAAGATCAAATATTACCCGACCACCACCCGTGAAG AGAGCCCGAAGATGGGCCGCATCACCGATCTGATGCGCAGCGGAGAGGCGTTCAGTGATCTGGGCGTGGCGCCCCTGAAC GCCGAGACGGACCGCGCGATGATCTGCGGGAACCTGGCCTTCAATCTTGAGCTGAAAGATATGTTCGAGGATTACGGGTT GGAGGAAGGGGCGAATTCCAAGCCTGCACATTATGTGGTCGAGAAGGCGTTTCTGGACTAA
Upstream 100 bases:
>100_bases ATTATCAGGCCCGCCTGCGGGGCAGTGCCGCTTAACCGCCCTTTCCCTGATCCAGATCAACGATTAATGCTAAGGAGCGG GCGCATAGATCGCCCGAGCA
Downstream 100 bases:
>100_bases AAAACCACGTTAAGAACACCCGATACGACGCTACTACAAAAAGAAAAGCCCCCGCAGAACCTCGCGGGGGCTTTCATGTC TCAAGCGGGGCGCGCAGCAG
Product: ferredoxin--NADP(+) reductase
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MMTEQTPVTQTDAAPVKATPTLPDAQTVTEVKHYTDRLFSFRCTRPASLRFRSGEFVMIGLMGEPHPETGKQKPLLRAYS IASPSWDEELEFYSIKVPDGPLTSRLQHIQPGEQIILRPKPVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTYED YDEIIITHTCREVGELTYGRDLIAALQHDELLNEVIGDGFWKKIKYYPTTTREESPKMGRITDLMRSGEAFSDLGVAPLN AETDRAMICGNLAFNLELKDMFEDYGLEEGANSKPAHYVVEKAFLD
Sequences:
>Translated_286_residues MMTEQTPVTQTDAAPVKATPTLPDAQTVTEVKHYTDRLFSFRCTRPASLRFRSGEFVMIGLMGEPHPETGKQKPLLRAYS IASPSWDEELEFYSIKVPDGPLTSRLQHIQPGEQIILRPKPVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTYED YDEIIITHTCREVGELTYGRDLIAALQHDELLNEVIGDGFWKKIKYYPTTTREESPKMGRITDLMRSGEAFSDLGVAPLN AETDRAMICGNLAFNLELKDMFEDYGLEEGANSKPAHYVVEKAFLD >Mature_286_residues MMTEQTPVTQTDAAPVKATPTLPDAQTVTEVKHYTDRLFSFRCTRPASLRFRSGEFVMIGLMGEPHPETGKQKPLLRAYS IASPSWDEELEFYSIKVPDGPLTSRLQHIQPGEQIILRPKPVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTYED YDEIIITHTCREVGELTYGRDLIAALQHDELLNEVIGDGFWKKIKYYPTTTREESPKMGRITDLMRSGEAFSDLGVAPLN AETDRAMICGNLAFNLELKDMFEDYGLEEGANSKPAHYVVEKAFLD
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=257, Percent_Identity=29.5719844357977, Blast_Score=108, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 32176; Mature: 32176
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTEQTPVTQTDAAPVKATPTLPDAQTVTEVKHYTDRLFSFRCTRPASLRFRSGEFVMIG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEEEEE LMGEPHPETGKQKPLLRAYSIASPSWDEELEFYSIKVPDGPLTSRLQHIQPGEQIILRPK ECCCCCCCCCCCCCCHHEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCC PVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTYEDYDEIIITHTCREVGELTYGR CCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHCCH DLIAALQHDELLNEVIGDGFWKKIKYYPTTTREESPKMGRITDLMRSGEAFSDLGVAPLN HHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCC AETDRAMICGNLAFNLELKDMFEDYGLEEGANSKPAHYVVEKAFLD CCCCCEEEECCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MMTEQTPVTQTDAAPVKATPTLPDAQTVTEVKHYTDRLFSFRCTRPASLRFRSGEFVMIG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEEEEE LMGEPHPETGKQKPLLRAYSIASPSWDEELEFYSIKVPDGPLTSRLQHIQPGEQIILRPK ECCCCCCCCCCCCCCHHEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCC PVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTYEDYDEIIITHTCREVGELTYGR CCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHCCH DLIAALQHDELLNEVIGDGFWKKIKYYPTTTREESPKMGRITDLMRSGEAFSDLGVAPLN HHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCC AETDRAMICGNLAFNLELKDMFEDYGLEEGANSKPAHYVVEKAFLD CCCCCEEEECCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]