Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054262

Identifier: 89054262

GI number: 89054262

Start: 1759751

End: 1760173

Strand: Reverse

Name: 89054262

Synonym: Jann_1771

Alternate gene names: NA

Gene position: 1760173-1759751 (Counterclockwise)

Preceding gene: 89054263

Following gene: 89054261

Centisome position: 40.76

GC content: 65.01

Gene sequence:

>423_bases
ATGGCCCAGACGATTGTAACCGATACGGGATTTGCGCCCGACGACTGGAACGGACACGCCGCCCCCCTGGCCGATGGTTT
GCCTGCCAATGCCTCTGCCGTCGATGTCGCACCGTCGGACGATGTGGCCGCACTGGCGGATGTGTTAACGCAGTTAACCA
TGATCCGCGTGGGCTTCCCCAGCTCTGCCGATGGCCGCGGGTTCACGCTGGCTAAACGCCTGCGCGCGATGGGGTATACC
GGGCGATTGCGCGCCCAGGGTCACGTTTTGGCGGATCAGTACGCGATGGCGCGGCGGTCCGGGTTTGATGAGGTGGAGAT
TGACGACGCACTCGCCACCCGTCAGCCCGAATCCCAGTGGCTGGCGCGCGCCGATTGGCAGGCCCATGATTATCAGGCCC
GCCTGCGGGGCAGTGCCGCTTAA

Upstream 100 bases:

>100_bases
GACGGTGGCGGGGATCCGCGAAGACCGAATGCGGCATTCATTTCGAGGACGCGAAGCCGCTTCGGCGCGCGTCCTGACAG
TTCAAGGAAAGGGACCCGCC

Downstream 100 bases:

>100_bases
CCGCCCTTTCCCTGATCCAGATCAACGATTAATGCTAAGGAGCGGGCGCATAGATCGCCCGAGCAATGATGACCGAGCAA
ACACCCGTGACCCAGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYT
GRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA

Sequences:

>Translated_140_residues
MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYT
GRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA
>Mature_139_residues
AQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYTG
RLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14999; Mature: 14868

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFP
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCC
SSADGRGFTLAKRLRAMGYTGRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQW
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH
LARADWQAHDYQARLRGSAA
HHHCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
AQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFP
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCC
SSADGRGFTLAKRLRAMGYTGRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQW
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH
LARADWQAHDYQARLRGSAA
HHHCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA