Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054262
Identifier: 89054262
GI number: 89054262
Start: 1759751
End: 1760173
Strand: Reverse
Name: 89054262
Synonym: Jann_1771
Alternate gene names: NA
Gene position: 1760173-1759751 (Counterclockwise)
Preceding gene: 89054263
Following gene: 89054261
Centisome position: 40.76
GC content: 65.01
Gene sequence:
>423_bases ATGGCCCAGACGATTGTAACCGATACGGGATTTGCGCCCGACGACTGGAACGGACACGCCGCCCCCCTGGCCGATGGTTT GCCTGCCAATGCCTCTGCCGTCGATGTCGCACCGTCGGACGATGTGGCCGCACTGGCGGATGTGTTAACGCAGTTAACCA TGATCCGCGTGGGCTTCCCCAGCTCTGCCGATGGCCGCGGGTTCACGCTGGCTAAACGCCTGCGCGCGATGGGGTATACC GGGCGATTGCGCGCCCAGGGTCACGTTTTGGCGGATCAGTACGCGATGGCGCGGCGGTCCGGGTTTGATGAGGTGGAGAT TGACGACGCACTCGCCACCCGTCAGCCCGAATCCCAGTGGCTGGCGCGCGCCGATTGGCAGGCCCATGATTATCAGGCCC GCCTGCGGGGCAGTGCCGCTTAA
Upstream 100 bases:
>100_bases GACGGTGGCGGGGATCCGCGAAGACCGAATGCGGCATTCATTTCGAGGACGCGAAGCCGCTTCGGCGCGCGTCCTGACAG TTCAAGGAAAGGGACCCGCC
Downstream 100 bases:
>100_bases CCGCCCTTTCCCTGATCCAGATCAACGATTAATGCTAAGGAGCGGGCGCATAGATCGCCCGAGCAATGATGACCGAGCAA ACACCCGTGACCCAGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYT GRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA
Sequences:
>Translated_140_residues MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYT GRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA >Mature_139_residues AQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFPSSADGRGFTLAKRLRAMGYTG RLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQWLARADWQAHDYQARLRGSAA
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14999; Mature: 14868
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFP CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCC SSADGRGFTLAKRLRAMGYTGRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQW CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH LARADWQAHDYQARLRGSAA HHHCCCCCCCHHHHHCCCCC >Mature Secondary Structure AQTIVTDTGFAPDDWNGHAAPLADGLPANASAVDVAPSDDVAALADVLTQLTMIRVGFP CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCC SSADGRGFTLAKRLRAMGYTGRLRAQGHVLADQYAMARRSGFDEVEIDDALATRQPESQW CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH LARADWQAHDYQARLRGSAA HHHCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA