Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is hisD1 [H]
Identifier: 89053889
GI number: 89053889
Start: 1368157
End: 1369464
Strand: Direct
Name: hisD1 [H]
Synonym: Jann_1398
Alternate gene names: 89053889
Gene position: 1368157-1369464 (Clockwise)
Preceding gene: 89053887
Following gene: 89053890
Centisome position: 31.69
GC content: 63.07
Gene sequence:
>1308_bases ATGACAAGAGAGTACCTCAAGAAAGCGCCACTGACCTCCGCCTCCGATGCGTCGGATGTGCAGGAAACCGTGCGCACGAT CCTTGCCGATATCGAGGCGGGCGGTGACGACAAGGCCCGCGAATATGCGGCAAAGTTCGACAAGTATGAGGGCAACATCA TCCTGACTGCCGAAGAGATCGAGGCCGCAAGCGCGCTGGTTCCCGATAAGCTGAAGGCCGACATCCAGTTCGCTCATGAC AACGTCCGACGGTTCGCAGAGGCCCAGAAGGCCACCGTCAGTGACGTGGAGGTTGAGATCGTGCCGGGCCTGATCGCCGG GCAGAAAGCCATCCCCGTCGATGCGGCGGGCTGCTACGTGCCCGGGGGTCGCTACAGCCACATCGCGTCCGCCATCATGA CGGTGACAACAGCGAAGGTGGCGGGCTGCAACCACATCATCGCAACCTCGCCACCCCGCCCCGGCGTTGGCGTGGCGCCC GCGATTGTCTACGCGGCCCATATTTGCGGCGCGGACACGATCATGGCGTTAGGTGGCGTGCAGGGCATCGCGGCGATGAC CTTCGGCCTTTTCGGTCTGCCAAAGGCGAACATCCTCGTGGGCCCCGGCAACCAGTTCGTGGCGGAAGCCAAGCGCCATC TCTTTGGCCGTGTGGGCATCGACATGATCGCAGGTCCGACGGATAGTCTGATCCTGGCCGACAAGACCGCTGATCCCCAT GTCGTCGCGACAGACCTCGTGAGCCAGGCCGAGCATGGCTACAACTCGCCGGTCTGGCTGGTCACGGACAGCAAGGACCT GGCTGAGGATGTGATGGCCCGCATTCCCGCGCTGATTGATGATCTGCCTGAGACCAACCGCGAAAACGCAGCTGCCGCGT GGCGCGATTATGCCGAGGTCATCGTCTGTGCGGACCGCGAAGACATGGCGGCCTGCTCCGACGAGTACGCGCCCGAGCAC CTGACGGTGCAGGCCGAGGATCTGGCGTGGTGGAAGGGGCGGCTCAGTTGCTATGGCTCGCTGTTTCTGGGCGAAGAGAC GACCGTGTCTTATGGCGACAAGGCGGCGGGGACAAACCACGTTCTGCCAACATCGGGTGCGGCCAGCTACACAGGCGGGC TTTCGGTCCATAAATACATGAAGATCGTCACCTGGCAGCAGGCGACGCGCGAAGGCTCCAAGGATGTGGCGATTGCCACG GCGCGGATCTCTCGTCTGGAAGGGATGGAGGGGCACGCCCGGTCTGCGGATGTGCGGCTGGCCAAGTATTTCCCCGGCGA GAACTTTGACCTCAGCGCCGATGGTTGA
Upstream 100 bases:
>100_bases AGGGCTTACACACACGTTAACGGAATCGCGCATCGCGGGCTCAGGCCGCCGGGGTGTGTTGCTTCACCTGCCTTTTGAGC CACCGATAGGACCGCCCCAG
Downstream 100 bases:
>100_bases TGCCGGCGCGCTCTTTGATCTGCGCGGCCGGGTGGCTTGCGTCACCGGGGCCTCCGCGGGTCTGGGGCAGCGCGCGGCTG AGGTCTTGGCGGATGCCGGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 1 [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTREYLKKAPLTSASDASDVQETVRTILADIEAGGDDKAREYAAKFDKYEGNIILTAEEIEAASALVPDKLKADIQFAHD NVRRFAEAQKATVSDVEVEIVPGLIAGQKAIPVDAAGCYVPGGRYSHIASAIMTVTTAKVAGCNHIIATSPPRPGVGVAP AIVYAAHICGADTIMALGGVQGIAAMTFGLFGLPKANILVGPGNQFVAEAKRHLFGRVGIDMIAGPTDSLILADKTADPH VVATDLVSQAEHGYNSPVWLVTDSKDLAEDVMARIPALIDDLPETNRENAAAAWRDYAEVIVCADREDMAACSDEYAPEH LTVQAEDLAWWKGRLSCYGSLFLGEETTVSYGDKAAGTNHVLPTSGAASYTGGLSVHKYMKIVTWQQATREGSKDVAIAT ARISRLEGMEGHARSADVRLAKYFPGENFDLSADG
Sequences:
>Translated_435_residues MTREYLKKAPLTSASDASDVQETVRTILADIEAGGDDKAREYAAKFDKYEGNIILTAEEIEAASALVPDKLKADIQFAHD NVRRFAEAQKATVSDVEVEIVPGLIAGQKAIPVDAAGCYVPGGRYSHIASAIMTVTTAKVAGCNHIIATSPPRPGVGVAP AIVYAAHICGADTIMALGGVQGIAAMTFGLFGLPKANILVGPGNQFVAEAKRHLFGRVGIDMIAGPTDSLILADKTADPH VVATDLVSQAEHGYNSPVWLVTDSKDLAEDVMARIPALIDDLPETNRENAAAAWRDYAEVIVCADREDMAACSDEYAPEH LTVQAEDLAWWKGRLSCYGSLFLGEETTVSYGDKAAGTNHVLPTSGAASYTGGLSVHKYMKIVTWQQATREGSKDVAIAT ARISRLEGMEGHARSADVRLAKYFPGENFDLSADG >Mature_434_residues TREYLKKAPLTSASDASDVQETVRTILADIEAGGDDKAREYAAKFDKYEGNIILTAEEIEAASALVPDKLKADIQFAHDN VRRFAEAQKATVSDVEVEIVPGLIAGQKAIPVDAAGCYVPGGRYSHIASAIMTVTTAKVAGCNHIIATSPPRPGVGVAPA IVYAAHICGADTIMALGGVQGIAAMTFGLFGLPKANILVGPGNQFVAEAKRHLFGRVGIDMIAGPTDSLILADKTADPHV VATDLVSQAEHGYNSPVWLVTDSKDLAEDVMARIPALIDDLPETNRENAAAAWRDYAEVIVCADREDMAACSDEYAPEHL TVQAEDLAWWKGRLSCYGSLFLGEETTVSYGDKAAGTNHVLPTSGAASYTGGLSVHKYMKIVTWQQATREGSKDVAIATA RISRLEGMEGHARSADVRLAKYFPGENFDLSADG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=37.2037914691943, Blast_Score=261, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6319819, Length=424, Percent_Identity=33.7264150943396, Blast_Score=231, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46207; Mature: 46076
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREYLKKAPLTSASDASDVQETVRTILADIEAGGDDKAREYAAKFDKYEGNIILTAEEI CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHH EAASALVPDKLKADIQFAHDNVRRFAEAQKATVSDVEVEIVPGLIAGQKAIPVDAAGCYV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCC PGGRYSHIASAIMTVTTAKVAGCNHIIATSPPRPGVGVAPAIVYAAHICGADTIMALGGV CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCH QGIAAMTFGLFGLPKANILVGPGNQFVAEAKRHLFGRVGIDMIAGPTDSLILADKTADPH HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCC VVATDLVSQAEHGYNSPVWLVTDSKDLAEDVMARIPALIDDLPETNRENAAAAWRDYAEV CHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEE IVCADREDMAACSDEYAPEHLTVQAEDLAWWKGRLSCYGSLFLGEETTVSYGDKAAGTNH EEECCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCCC VLPTSGAASYTGGLSVHKYMKIVTWQQATREGSKDVAIATARISRLEGMEGHARSADVRL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCEEE AKYFPGENFDLSADG EEECCCCCCCCCCCC >Mature Secondary Structure TREYLKKAPLTSASDASDVQETVRTILADIEAGGDDKAREYAAKFDKYEGNIILTAEEI CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHH EAASALVPDKLKADIQFAHDNVRRFAEAQKATVSDVEVEIVPGLIAGQKAIPVDAAGCYV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCC PGGRYSHIASAIMTVTTAKVAGCNHIIATSPPRPGVGVAPAIVYAAHICGADTIMALGGV CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCH QGIAAMTFGLFGLPKANILVGPGNQFVAEAKRHLFGRVGIDMIAGPTDSLILADKTADPH HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCC VVATDLVSQAEHGYNSPVWLVTDSKDLAEDVMARIPALIDDLPETNRENAAAAWRDYAEV CHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEE IVCADREDMAACSDEYAPEHLTVQAEDLAWWKGRLSCYGSLFLGEETTVSYGDKAAGTNH EEECCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCCC VLPTSGAASYTGGLSVHKYMKIVTWQQATREGSKDVAIATARISRLEGMEGHARSADVRL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCEEE AKYFPGENFDLSADG EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA