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The map label for this gene is 89053871

Identifier: 89053871

GI number: 89053871

Start: 1349485

End: 1350159

Strand: Direct

Name: 89053871

Synonym: Jann_1380

Alternate gene names: NA

Gene position: 1349485-1350159 (Clockwise)

Preceding gene: 89053866

Following gene: 89053872

Centisome position: 31.25

GC content: 63.26

Gene sequence:

>675_bases
ATGCAACCCTGGATACATCTGGCGACCGCAGCCACGCCGGAGGGCGATCTTTTGCGGCTGTCGCGCCGGGGGGTGGAGTA
TTCGATCCGGCTTGAGGGCGGAAATGAGCTGATGAATTCGCGCCTTGGTGGCTCGGAGGAGGCATTGGCCACGCTGGCAT
TCGATCATTTGGCTCATAGGTCCGCCCCCCGGGTGTTGATCGGCGGTTTGGGCATGGGGTTCACCCTACGCGCGGCCCAG
GACAGAGCCCCCGATGCCGCGCAACTGATTGTGGCCGAGATCGTTCCCGAGCTTGTTTTGTGGGCGCGTGAGCATATGGG
CCCCGTCTTTGGTACGTGTCTTGAAGATCCAAGGGTCAGCATCACGACAGGGGATGTCGCGACCCTGATCCGCGATGCCA
CAACACCATTCGACGCGATCTTATTGGACGTCGACAATGGTCCCGACGGGCTGACGCGGACGGAGAATGACGCGCTGTAT
TCCGTCGCAGGGCTGAAGACCGCGCGGCAGGCTTTGCGCGCAGGCGGCGTACTGGCCGTTTGGTCGGCCCATCCCGACGC
GGCCTTTACCAAGCGTTTGGCGCTGTGCGGATACGACGTGACCACGCATAACGTGCGCGCCAGTCGGGCAAAACGGGGCA
GTCGCCACACGATCTGGATCGCGCGCGCGGGTTAG

Upstream 100 bases:

>100_bases
AAAGGTCCTTAAAAATCGTGAACGGATGGGGGCTCCGTGCTTCATTTTTGATCCATGATCCGATACCTCAGCGCTTTCGG
CCGCGAGAGGACTCCTTGTC

Downstream 100 bases:

>100_bases
CGGGTTCCGTGCTTTGGGCGGCCGTGTGCAACTATGCGGCGAGTGATGGGCCCAGGCGCTCCGTCAAGGGTGTTTGGACC
GGCTTTCGGGGCTGATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQPWIHLATAATPEGDLLRLSRRGVEYSIRLEGGNELMNSRLGGSEEALATLAFDHLAHRSAPRVLIGGLGMGFTLRAAQ
DRAPDAAQLIVAEIVPELVLWAREHMGPVFGTCLEDPRVSITTGDVATLIRDATTPFDAILLDVDNGPDGLTRTENDALY
SVAGLKTARQALRAGGVLAVWSAHPDAAFTKRLALCGYDVTTHNVRASRAKRGSRHTIWIARAG

Sequences:

>Translated_224_residues
MQPWIHLATAATPEGDLLRLSRRGVEYSIRLEGGNELMNSRLGGSEEALATLAFDHLAHRSAPRVLIGGLGMGFTLRAAQ
DRAPDAAQLIVAEIVPELVLWAREHMGPVFGTCLEDPRVSITTGDVATLIRDATTPFDAILLDVDNGPDGLTRTENDALY
SVAGLKTARQALRAGGVLAVWSAHPDAAFTKRLALCGYDVTTHNVRASRAKRGSRHTIWIARAG
>Mature_224_residues
MQPWIHLATAATPEGDLLRLSRRGVEYSIRLEGGNELMNSRLGGSEEALATLAFDHLAHRSAPRVLIGGLGMGFTLRAAQ
DRAPDAAQLIVAEIVPELVLWAREHMGPVFGTCLEDPRVSITTGDVATLIRDATTPFDAILLDVDNGPDGLTRTENDALY
SVAGLKTARQALRAGGVLAVWSAHPDAAFTKRLALCGYDVTTHNVRASRAKRGSRHTIWIARAG

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24067; Mature: 24067

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPWIHLATAATPEGDLLRLSRRGVEYSIRLEGGNELMNSRLGGSEEALATLAFDHLAHR
CCCCEEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHC
SAPRVLIGGLGMGFTLRAAQDRAPDAAQLIVAEIVPELVLWAREHMGPVFGTCLEDPRVS
CCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEE
ITTGDVATLIRDATTPFDAILLDVDNGPDGLTRTENDALYSVAGLKTARQALRAGGVLAV
EECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEE
WSAHPDAAFTKRLALCGYDVTTHNVRASRAKRGSRHTIWIARAG
EECCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MQPWIHLATAATPEGDLLRLSRRGVEYSIRLEGGNELMNSRLGGSEEALATLAFDHLAHR
CCCCEEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHC
SAPRVLIGGLGMGFTLRAAQDRAPDAAQLIVAEIVPELVLWAREHMGPVFGTCLEDPRVS
CCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEE
ITTGDVATLIRDATTPFDAILLDVDNGPDGLTRTENDALYSVAGLKTARQALRAGGVLAV
EECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEE
WSAHPDAAFTKRLALCGYDVTTHNVRASRAKRGSRHTIWIARAG
EECCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA