Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053862
Identifier: 89053862
GI number: 89053862
Start: 1339433
End: 1340509
Strand: Direct
Name: 89053862
Synonym: Jann_1371
Alternate gene names: NA
Gene position: 1339433-1340509 (Clockwise)
Preceding gene: 89053861
Following gene: 89053864
Centisome position: 31.02
GC content: 63.6
Gene sequence:
>1077_bases ATGAACCGCCGTGACCTGCTCGTCGGCCTTGGGGCTGCAACCCTTGTGCCAAAGGCGTCCTGGGCCGATGCCCATAATCC GGCGTTCCTGTCAGCCGCCCAAGCCCCCGACGGCAATTATCACCTTTGCGGATTGGACCCCCGCGGCGACGTCGTGTTCA GTATACCGCTTCCCGGTCGTGGCCATGCGGCCGCAGCCCATCCCACCCGGCCGGAGGCGGTGGCTTTCGCCCGTCGCCCG GGCCGCTTCGCGCTTATCCTCGATTGTGTCACCGGGCAGGAAACGGCGCGTCTTCTGCCTCCGCCAAACCGCCACTTCTA TGGCCACGGGACGTTTTCATCCGATGGCGATGTTCTGTTCACAACAGAGAATGACCTCACCACCCTCGAAGGACGGATCG GCCTATGGGATGCGGCGCATGGCTATGTGCGTCTCGGTGATGTGCCGTCTGGCGGCATTGGCCCCCACGACATCGCGCGC CTGCCGGGCACGGAGACGCTGGTGATCGCCAACGGCGGGATCGCGACCCATCCTGATAGTGGTCGCACGCCGCTGAACCC GGCCACAATGCGGTCCAACCTTGCCTATATGCGCACCGATGGCACCTTGTTGGAGCGCGTTGAGCTGGATGTGACACTGC GCCAGAACTCCATTCGCCATCTCTCCATCCGCGATGACGGGCTGGTTTCGGCGGGGATGCAGTGGAACGGCGCCGAAGGG GAACACCCGCCGCTGACCCTTCTTCACCGCATCGGTGCCGCCCCTCGCTTGCTGGCCGCCCCAACCCAGACCCATCGACA GCTTGATGGCTATGTCGGCAGCATTTCCTTCGATCAGGCCGGAGCGCATGTGGCCGTGACATCGCCCAGAGGCGGCACGG TCCATATCTTTGACGTCAATAGCGGTGCCTTTGCAGGGCTGATCACTGCCGAAGACATCTGCGGGCTAGCCCTGTCGCAC CGCGCGGGCCTGATCGCGACCACCGGGCAAGGTATCACCGGGTTTGTCGCCCAAGATGACCTGACCCAAATGCGGCATTC AAGCTGGAGATGGGACAACCACATTGTCGCGATTTGA
Upstream 100 bases:
>100_bases GCAACAACGCATCCGCGACGCCCGCGCCCTTGCGGCGACAGACCTTGGGCCGACCCTTGGGGTCGCGGCGGGGTTCAATT CGCTCGATGGAGACTGAGGT
Downstream 100 bases:
>100_bases GTATGCGGCTTGCCTCATCGAAATGATGCCATAGCGGATCTCGCGGGCGTTGGCCTCATCGTCGAAGCCTACACCAAGAA CCGGCGGCTGAGCGGCAGGC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MNRRDLLVGLGAATLVPKASWADAHNPAFLSAAQAPDGNYHLCGLDPRGDVVFSIPLPGRGHAAAAHPTRPEAVAFARRP GRFALILDCVTGQETARLLPPPNRHFYGHGTFSSDGDVLFTTENDLTTLEGRIGLWDAAHGYVRLGDVPSGGIGPHDIAR LPGTETLVIANGGIATHPDSGRTPLNPATMRSNLAYMRTDGTLLERVELDVTLRQNSIRHLSIRDDGLVSAGMQWNGAEG EHPPLTLLHRIGAAPRLLAAPTQTHRQLDGYVGSISFDQAGAHVAVTSPRGGTVHIFDVNSGAFAGLITAEDICGLALSH RAGLIATTGQGITGFVAQDDLTQMRHSSWRWDNHIVAI
Sequences:
>Translated_358_residues MNRRDLLVGLGAATLVPKASWADAHNPAFLSAAQAPDGNYHLCGLDPRGDVVFSIPLPGRGHAAAAHPTRPEAVAFARRP GRFALILDCVTGQETARLLPPPNRHFYGHGTFSSDGDVLFTTENDLTTLEGRIGLWDAAHGYVRLGDVPSGGIGPHDIAR LPGTETLVIANGGIATHPDSGRTPLNPATMRSNLAYMRTDGTLLERVELDVTLRQNSIRHLSIRDDGLVSAGMQWNGAEG EHPPLTLLHRIGAAPRLLAAPTQTHRQLDGYVGSISFDQAGAHVAVTSPRGGTVHIFDVNSGAFAGLITAEDICGLALSH RAGLIATTGQGITGFVAQDDLTQMRHSSWRWDNHIVAI >Mature_358_residues MNRRDLLVGLGAATLVPKASWADAHNPAFLSAAQAPDGNYHLCGLDPRGDVVFSIPLPGRGHAAAAHPTRPEAVAFARRP GRFALILDCVTGQETARLLPPPNRHFYGHGTFSSDGDVLFTTENDLTTLEGRIGLWDAAHGYVRLGDVPSGGIGPHDIAR LPGTETLVIANGGIATHPDSGRTPLNPATMRSNLAYMRTDGTLLERVELDVTLRQNSIRHLSIRDDGLVSAGMQWNGAEG EHPPLTLLHRIGAAPRLLAAPTQTHRQLDGYVGSISFDQAGAHVAVTSPRGGTVHIFDVNSGAFAGLITAEDICGLALSH RAGLIATTGQGITGFVAQDDLTQMRHSSWRWDNHIVAI
Specific function: Unknown
COG id: COG3490
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38042; Mature: 38042
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRDLLVGLGAATLVPKASWADAHNPAFLSAAQAPDGNYHLCGLDPRGDVVFSIPLPGR CCCCEEEEECCHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCC GHAAAAHPTRPEAVAFARRPGRFALILDCVTGQETARLLPPPNRHFYGHGTFSSDGDVLF CCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCCCCCEEE TTENDLTTLEGRIGLWDAAHGYVRLGDVPSGGIGPHDIARLPGTETLVIANGGIATHPDS EECCCCEEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEECCCEEECCCC GRTPLNPATMRSNLAYMRTDGTLLERVELDVTLRQNSIRHLSIRDDGLVSAGMQWNGAEG CCCCCCHHHHHCCEEEEECCCCEEEEEEEEEEEECCCEEEEEECCCCEEECCCEECCCCC EHPPLTLLHRIGAAPRLLAAPTQTHRQLDGYVGSISFDQAGAHVAVTSPRGGTVHIFDVN CCCCHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEEECCCCCEEEEECCCCCEEEEEECC SGAFAGLITAEDICGLALSHRAGLIATTGQGITGFVAQDDLTQMRHSSWRWDNHIVAI CCCEEEEEEHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure MNRRDLLVGLGAATLVPKASWADAHNPAFLSAAQAPDGNYHLCGLDPRGDVVFSIPLPGR CCCCEEEEECCHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCC GHAAAAHPTRPEAVAFARRPGRFALILDCVTGQETARLLPPPNRHFYGHGTFSSDGDVLF CCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCCCCCEEE TTENDLTTLEGRIGLWDAAHGYVRLGDVPSGGIGPHDIARLPGTETLVIANGGIATHPDS EECCCCEEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEECCCEEECCCC GRTPLNPATMRSNLAYMRTDGTLLERVELDVTLRQNSIRHLSIRDDGLVSAGMQWNGAEG CCCCCCHHHHHCCEEEEECCCCEEEEEEEEEEEECCCEEEEEECCCCEEECCCEECCCCC EHPPLTLLHRIGAAPRLLAAPTQTHRQLDGYVGSISFDQAGAHVAVTSPRGGTVHIFDVN CCCCHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEEECCCCCEEEEECCCCCEEEEEECC SGAFAGLITAEDICGLALSHRAGLIATTGQGITGFVAQDDLTQMRHSSWRWDNHIVAI CCCEEEEEEHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA