Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053837
Identifier: 89053837
GI number: 89053837
Start: 1311884
End: 1312156
Strand: Direct
Name: 89053837
Synonym: Jann_1346
Alternate gene names: NA
Gene position: 1311884-1312156 (Clockwise)
Preceding gene: 89053836
Following gene: 89053839
Centisome position: 30.38
GC content: 61.17
Gene sequence:
>273_bases ATGCAGATTGATCCGCATCAGCGCGGTCTTAGCGATGGTTCAGGCCTTCGAGGCCGGGCACATTACCTGAGATGCGCCAA GGTGAATACCCGGCTGCCCCCGTGTTCATTGCGAAGGCGGCCCGGCTTGGGGATAGCTATGACCGTCTCAAATGCGATCA AATCAGGCACGACGCACAAACGGTGGACCAATGTCTGCAACGAGGTTGCGGCGGGACGCCTTCGCGTCCGCGATCTGGCC CGCGAACCAGTCATCGGATCGCGGGTGGGCTGA
Upstream 100 bases:
>100_bases GTTTCCAAGTTTCATACGACATCCGACCCGGACAGATCTTCAGGATCGGCAAATCTCGCACCAACCTCTCTCCCCACGAA GCCCAATCAAACCACTCTGT
Downstream 100 bases:
>100_bases GGGATCCACGGAGGCGAATATCCGCAACAAGCTCATGGCGGCGAAGGGGAGTTCCGTTCTCCAGAAGGTCGATCAGCGCC TTTGCGGCAAGACGCCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MQIDPHQRGLSDGSGLRGRAHYLRCAKVNTRLPPCSLRRRPGLGIAMTVSNAIKSGTTHKRWTNVCNEVAAGRLRVRDLA REPVIGSRVG
Sequences:
>Translated_90_residues MQIDPHQRGLSDGSGLRGRAHYLRCAKVNTRLPPCSLRRRPGLGIAMTVSNAIKSGTTHKRWTNVCNEVAAGRLRVRDLA REPVIGSRVG >Mature_90_residues MQIDPHQRGLSDGSGLRGRAHYLRCAKVNTRLPPCSLRRRPGLGIAMTVSNAIKSGTTHKRWTNVCNEVAAGRLRVRDLA REPVIGSRVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9872; Mature: 9872
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIDPHQRGLSDGSGLRGRAHYLRCAKVNTRLPPCSLRRRPGLGIAMTVSNAIKSGTTHK CCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCHH RWTNVCNEVAAGRLRVRDLAREPVIGSRVG HHHHHHHHHHHCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQIDPHQRGLSDGSGLRGRAHYLRCAKVNTRLPPCSLRRRPGLGIAMTVSNAIKSGTTHK CCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCHH RWTNVCNEVAAGRLRVRDLAREPVIGSRVG HHHHHHHHHHHCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA