Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053839

Identifier: 89053839

GI number: 89053839

Start: 1313247

End: 1313537

Strand: Direct

Name: 89053839

Synonym: Jann_1348

Alternate gene names: NA

Gene position: 1313247-1313537 (Clockwise)

Preceding gene: 89053837

Following gene: 89053840

Centisome position: 30.41

GC content: 53.95

Gene sequence:

>291_bases
TTGCATTTTAAAATTGTAACAGCTTACATTGGCGAACAGGATTCGTATGTCGGGAGGGACAGACGAGCTATGGCTTTCTT
GGCAGCGGCTATTTTACTGGCGGCCTTCATCGGTAACGTCATCTTGGGAGCGTCATCCAACTCGGCCATCCTTGGCAATG
TGGGGGAGATGTTGCTTCTGCTGTCGGCGTCGATTTTGTTCGTCATCGGGATCCTGAAAAAAGAAGCAGACGCCAAGGCA
GAGGCCGCAGCAGCCCAAGCCCGCGTCGACGACGTCCAGGGAGGACACTGA

Upstream 100 bases:

>100_bases
GACTGTCGTTCATCTGGGCTCAACCTGGGGGTGAAAGCATGGATGGCATGACAATCGGCCAAAACCGCCACGGTTCCAAT
GCTACACGAAATGTAAGCGC

Downstream 100 bases:

>100_bases
TTTGGATCACGACACTCAAGAGCTGAAGTCGGCAGAGCGCCGCAATTTCCTGAAGCTGACCGGCGCAGGTGCATTCACCG
CCGCCATGGTCGCCGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA
EAAAAQARVDDVQGGH

Sequences:

>Translated_96_residues
MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA
EAAAAQARVDDVQGGH
>Mature_96_residues
MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA
EAAAAQARVDDVQGGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10002; Mature: 10002

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLL
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LSASILFVIGILKKEADAKAEAAAAQARVDDVQGGH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLL
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LSASILFVIGILKKEADAKAEAAAAQARVDDVQGGH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA