Click here to switch to the map view.

The map label for this gene is ycjY [C]

Identifier: 89053810

GI number: 89053810

Start: 1283624

End: 1284574

Strand: Direct

Name: ycjY [C]

Synonym: Jann_1319

Alternate gene names: 89053810

Gene position: 1283624-1284574 (Clockwise)

Preceding gene: 89053809

Following gene: 89053811

Centisome position: 29.73

GC content: 64.77

Gene sequence:

>951_bases
ATGAAACTCGCAACCCTGTCCACCGCCGCCACCCTTCTGGCCACCTCGGCCATGGCCGACATCACAACCCGCACCGTGAC
CTTCGAGAACGAAGGCGCCACGCTGACCGGCACGCTGTACTTGCCAGCGGATCACAACGGGGTCGCCCTGCCGACCGTCG
TCGTGACCGGTGCCTGGACCTCCGTCCAACAGCAGATGCCCGCCACATACGCCGCCCAAATGGTGGAACGTGGCTTTGCG
GCCTTCACCTTCGACTTCCGCGGCTGGGGCGCATCGGGCGATCTGCCGCAGAACGTCCGCTTCGTGGAAAGCCCCGAGGC
CAAAACCTCTGACATCCGCGCCGCATTTGAATTTGTCGCCACGCTGCCAGAGGTGGATGCAGGCCAAATCTACGGCCTCG
GGATCTGTGCATCGGCTGGCTACATGGTAGACGCCGCCGCCGGGAACGATCTGGTGCAGCGCGTGGGCCTCGTCGCCCCT
TGGCTGCAAAACGAGGATTTGGTGAATGCGGTCTATGGCGGTGCCGAAGGCGTCAATGGCCTGATTGAGATGGGCCGCGC
TGCCGAGGCCGCAGGAGGTCAGATCATTCCTGCCGTCGGTCCGGAAGGGGCCGAGGGCGTGCTGATGCCCATCGGTGGCT
ACTATTATGAGGCCGACCGTGGCGCGATCCCCCAGTACGACAACCAGTGGAACAACGCGTCGTGGGAAGGCTGGCTGACC
TATCACCCCGCCGATAACCCGTCGCGTCTGACGCAGCCCTTGGCCATCGTTCATTCCGAGGCCGCCGCGATCCCGGATGG
CGTGCGCGCCTTCCTGGACGGGTTCACCGGCGAGGCGACACAGCAATGGCTCGAAGACGTCACGCAGTTCGACTTCTACG
ACAACCCCGCGGATGTAACCCGCGCCGCCGATACCGTGGCCGATCACTTCCGCGCAGGCACTGACGCCTGA

Upstream 100 bases:

>100_bases
AAAAACCGATCAAGCCGCTTCAATTAATGGGGGCTGGGGCGGCGTATCTCCAATGTCATCGGGCAGACAGCCCAAGACAT
TACAAACCGGAGATACCAAG

Downstream 100 bases:

>100_bases
TCTGCCCCCTGGCGCGGGACTGCCCCGCGCCAGCCCCTCTCTCATAATCTTATACAAGGACACGCCGCCATGCTTCGCTC
AACCCTTGCCGCTGCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKLATLSTAATLLATSAMADITTRTVTFENEGATLTGTLYLPADHNGVALPTVVVTGAWTSVQQQMPATYAAQMVERGFA
AFTFDFRGWGASGDLPQNVRFVESPEAKTSDIRAAFEFVATLPEVDAGQIYGLGICASAGYMVDAAAGNDLVQRVGLVAP
WLQNEDLVNAVYGGAEGVNGLIEMGRAAEAAGGQIIPAVGPEGAEGVLMPIGGYYYEADRGAIPQYDNQWNNASWEGWLT
YHPADNPSRLTQPLAIVHSEAAAIPDGVRAFLDGFTGEATQQWLEDVTQFDFYDNPADVTRAADTVADHFRAGTDA

Sequences:

>Translated_316_residues
MKLATLSTAATLLATSAMADITTRTVTFENEGATLTGTLYLPADHNGVALPTVVVTGAWTSVQQQMPATYAAQMVERGFA
AFTFDFRGWGASGDLPQNVRFVESPEAKTSDIRAAFEFVATLPEVDAGQIYGLGICASAGYMVDAAAGNDLVQRVGLVAP
WLQNEDLVNAVYGGAEGVNGLIEMGRAAEAAGGQIIPAVGPEGAEGVLMPIGGYYYEADRGAIPQYDNQWNNASWEGWLT
YHPADNPSRLTQPLAIVHSEAAAIPDGVRAFLDGFTGEATQQWLEDVTQFDFYDNPADVTRAADTVADHFRAGTDA
>Mature_316_residues
MKLATLSTAATLLATSAMADITTRTVTFENEGATLTGTLYLPADHNGVALPTVVVTGAWTSVQQQMPATYAAQMVERGFA
AFTFDFRGWGASGDLPQNVRFVESPEAKTSDIRAAFEFVATLPEVDAGQIYGLGICASAGYMVDAAAGNDLVQRVGLVAP
WLQNEDLVNAVYGGAEGVNGLIEMGRAAEAAGGQIIPAVGPEGAEGVLMPIGGYYYEADRGAIPQYDNQWNNASWEGWLT
YHPADNPSRLTQPLAIVHSEAAAIPDGVRAFLDGFTGEATQQWLEDVTQFDFYDNPADVTRAADTVADHFRAGTDA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=311, Percent_Identity=25.7234726688103, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 33479; Mature: 33479

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLATLSTAATLLATSAMADITTRTVTFENEGATLTGTLYLPADHNGVALPTVVVTGAWT
CCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCCCCEEECEEEEECCHH
SVQQQMPATYAAQMVERGFAAFTFDFRGWGASGDLPQNVRFVESPEAKTSDIRAAFEFVA
HHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
TLPEVDAGQIYGLGICASAGYMVDAAAGNDLVQRVGLVAPWLQNEDLVNAVYGGAEGVNG
HCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH
LIEMGRAAEAAGGQIIPAVGPEGAEGVLMPIGGYYYEADRGAIPQYDNQWNNASWEGWLT
HHHHCCHHHHCCCEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEE
YHPADNPSRLTQPLAIVHSEAAAIPDGVRAFLDGFTGEATQQWLEDVTQFDFYDNPADVT
ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
RAADTVADHFRAGTDA
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLATLSTAATLLATSAMADITTRTVTFENEGATLTGTLYLPADHNGVALPTVVVTGAWT
CCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCCCCEEECEEEEECCHH
SVQQQMPATYAAQMVERGFAAFTFDFRGWGASGDLPQNVRFVESPEAKTSDIRAAFEFVA
HHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
TLPEVDAGQIYGLGICASAGYMVDAAAGNDLVQRVGLVAPWLQNEDLVNAVYGGAEGVNG
HCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH
LIEMGRAAEAAGGQIIPAVGPEGAEGVLMPIGGYYYEADRGAIPQYDNQWNNASWEGWLT
HHHHCCHHHHCCCEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEE
YHPADNPSRLTQPLAIVHSEAAAIPDGVRAFLDGFTGEATQQWLEDVTQFDFYDNPADVT
ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH
RAADTVADHFRAGTDA
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]