Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is nuoL [H]
Identifier: 89053685
GI number: 89053685
Start: 1152368
End: 1154503
Strand: Direct
Name: nuoL [H]
Synonym: Jann_1194
Alternate gene names: 89053685
Gene position: 1152368-1154503 (Clockwise)
Preceding gene: 89053684
Following gene: 89053686
Centisome position: 26.69
GC content: 61.19
Gene sequence:
>2136_bases ATGGAAACGATCCTCCTCTTCGCCCCCCTCGTCGGCGCGCTGATCTGTGGCTTCTCTTGGCGCCTGATCGGCGAACAGGC GGCTTGCGTTATCGCCACGGGCTTCCTGTTCCTGTCGTGCCTTCTGTCCTGGGTCGTCTTCATCGGCTTCGAGGGAGAGA CCTACACACGCAGCCTGTTCACCTGGATTGAGTCCGGGACGCTCTTCACCGACTGGGCCATCCGCGTCGACCGTCTGACG GCGATCATGCTGATCGTGATCACCTCCGTGTCCGCCTTGGTACACCTCTATTCCTTCGGCTACATGGCCCATGACGAGAA CTTCAAGGAGGGCGAGAGCTACCGCCCAAGGTTCTTCGCCTACCTGTCGTTCTTCACCTTCACCATGCTGATGCTGGTGA CCGCCGATAACCTTCTGCAGCTGTTCTTCGGCTGGGAAGGCGTGGGCGTCGCGTCCTACCTGTTGATCGGTTTCTACTTC CGCAAACCCTCCGCAGGCGCGGCGGCGATGAAGGCGTTTATCGTCAACCGCGTGGGGGACTTCGGCTTCCTACTGGGCAT CTTCGCGCTGTTCTGGATGACGGACTCGATCCAGTTCGACGTCGTGCTTGGCATGGGCGCAGAGCTGGCCGAGATGTCGA TCATCTTCCTCGGGATGGAGCTGAACGCGGCGGAAACCATCGCCTTCCTGCTGTTCATCGGCGCGATGGGCAAGTCGGCG CAGTTGTTGCTGCACGTCTGGCTGCCCGACGCGATGGAGGGCCCGACGCCCGTGTCGGCCCTGATCCACGCGGCCACCAT GGTGACGGCGGGCGTCTTCCTTGTCTGCCGCATGTCCCCGGTGATCGAATACGCGCCGCTGGCGGGCAATTTCATCATCA TCATCGGCGCGCTGTCGGCCTTCGTGGCCGCCACAATCGGCCTGGTGCAGAACGACATCAAGCGCGTGATCGCCTATTCG ACGATGTCCCAGCTTGGCTACATGTTCGTCGCCGCGGGCGTCGGCGTCTATTCGGTCGCGATGTTCCACCTGCTGACCCA CGCGTTTTTCAAGGCGATGCTGTTTTTAGGCGCGGGTTCGGTCATCCACGCGATGCACCATGAGCAGGACATGCGGAACT ATGGCGGGCTGCGGAAGAAGATCCCCTACACGTTCTGGGCGATGATGATCGGCACTTTGGCGATCACCGGCGTGGGTATC CCGCTGCTTTACGTCGGTTTCCCGGTCGGCTTCGCGGGCTTCGTGTCCAAGGATGCGGTGATCGAGAGCGCCTATGCCTT CGGCGGAGACCTCGGCCAATTCGCCTTCTGGGCGTTGGTCATCGGCGCGCTGTTCACCAGCTTCTACTCCTGGCGCCTGA TGTTCCTGACCTTCTACGGCGAGGCGCGCGGCAACAAGCACACCCATGAACACGCTCATGAGAGCCCGATGACCATGCTG ATCCCACTGGGTGCGCTGGCCATTGGCGCGGTCGTGGCGGGTATGGTTTGGTATGGCAGTTTCTTCGGCAAAACCAATTA TGTGGCTCAGTTCTTCGGCGTGCCCTACGCGGTGGAAGAAGCCCATGGCGACGAGCACGCAGATGATCACAGCGGCGAGG ACGCGCATGGCGCGGAGGAGCAGGCTGAAGACCACGCAGCCGGGGGCGGACACGGCGACGACCCCCATTACGTCTTCACC GGCGCACCCGGAGAGGGCGCGATCCACCACGCCCCCGACAACCACGTTCTGAACGACGCGCACTCCGTTCCAAACTGGGT GAAGGTCGCCCCGTTCGTTGCAATGGTTCTGGGTTTTGCCACGGCCTACCTGTTCTACATCCTGAAACCGTCGATCCCCG GTCGCCTCGCGACACAACAAAAGCCGCTCTACAATTTCCTTTTGAACAAATGGTACTTTGACGAAGCCTATGAGTACCTG TTTATCAAGCCCGCCCAATGGCTTGGCCGGTTCCTGTGGAAGCGCGGCGACACAAACACGATTGACGGCAGCATCAACGG GCTGGCGATGGGGATCATCCCCTTCTTCACCCGCCTCGCGGGCCGCGCGCAATCCGGCTACATTTTCCATTACGCGTTCG CGATGGTGCTGGGGCTTGTCGCCATCATCATCTTCGTCACGTTGAGCGCGGGGTAA
Upstream 100 bases:
>100_bases GGATCCTGGATCGCCATCGGCATCCCAATCGCCATAGCCATCGGGCTGGTGCTGTACTTCGCGATTGCCAAAAACGACAC CGACAAGCGGGACTGACGCA
Downstream 100 bases:
>100_bases GGCATCATGGATAACCTCATCTCCATCGTCACATTCCTGCCCCTGGTGGCCGCGATCATCATGGCCGTGTTCCTGCGCGG CGAGGATGAGGCCGCGCAGT
Product: NADH dehydrogenase subunit L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLFTWIESGTLFTDWAIRVDRLT AIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFAYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYF RKPSAGAAAMKAFIVNRVGDFGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSA QLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPLAGNFIIIIGALSAFVAATIGLVQNDIKRVIAYS TMSQLGYMFVAAGVGVYSVAMFHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGI PLLYVGFPVGFAGFVSKDAVIESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHAHESPMTML IPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAHGDEHADDHSGEDAHGAEEQAEDHAAGGGHGDDPHYVFT GAPGEGAIHHAPDNHVLNDAHSVPNWVKVAPFVAMVLGFATAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEAYEYL FIKPAQWLGRFLWKRGDTNTIDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMVLGLVAIIIFVTLSAG
Sequences:
>Translated_711_residues METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLFTWIESGTLFTDWAIRVDRLT AIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFAYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYF RKPSAGAAAMKAFIVNRVGDFGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSA QLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPLAGNFIIIIGALSAFVAATIGLVQNDIKRVIAYS TMSQLGYMFVAAGVGVYSVAMFHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGI PLLYVGFPVGFAGFVSKDAVIESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHAHESPMTML IPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAHGDEHADDHSGEDAHGAEEQAEDHAAGGGHGDDPHYVFT GAPGEGAIHHAPDNHVLNDAHSVPNWVKVAPFVAMVLGFATAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEAYEYL FIKPAQWLGRFLWKRGDTNTIDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMVLGLVAIIIFVTLSAG >Mature_711_residues METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLFTWIESGTLFTDWAIRVDRLT AIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFAYLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYF RKPSAGAAAMKAFIVNRVGDFGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSA QLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPLAGNFIIIIGALSAFVAATIGLVQNDIKRVIAYS TMSQLGYMFVAAGVGVYSVAMFHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGI PLLYVGFPVGFAGFVSKDAVIESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHAHESPMTML IPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAHGDEHADDHSGEDAHGAEEQAEDHAAGGGHGDDPHYVFT GAPGEGAIHHAPDNHVLNDAHSVPNWVKVAPFVAMVLGFATAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEAYEYL FIKPAQWLGRFLWKRGDTNTIDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMVLGLVAIIIFVTLSAG
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=461, Percent_Identity=38.8286334056399, Blast_Score=287, Evalue=2e-77, Organism=Escherichia coli, GI1788614, Length=502, Percent_Identity=40.6374501992032, Blast_Score=332, Evalue=7e-92, Organism=Escherichia coli, GI1788829, Length=495, Percent_Identity=27.8787878787879, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1788827, Length=441, Percent_Identity=28.7981859410431, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1788831, Length=346, Percent_Identity=30.3468208092486, Blast_Score=119, Evalue=9e-28, Organism=Escherichia coli, GI2367154, Length=225, Percent_Identity=30.2222222222222, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1788613, Length=459, Percent_Identity=24.6187363834423, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI145693160, Length=300, Percent_Identity=27, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 77980; Mature: 77980
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLF CCCEEHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TWIESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFA HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH YLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVNRVGD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH FGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSA HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHCCCCCC QLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPLAGNFIIIIGALSA EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHH FVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGVYSVAMFHLLTHAFFKAMLFLGAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLLYVGFPVGFAGFVSKDAV HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH IESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHAHESPMTML HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCCEEE IPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAHGDEHADDHSGEDAHGAEE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCCCHH QAEDHAAGGGHGDDPHYVFTGAPGEGAIHHAPDNHVLNDAHSVPNWVKVAPFVAMVLGFA HHHHCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHH TAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEAYEYLFIKPAQWLGRFLWKRGDTNT HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEEHHHHHHHHHHHCCCCCE IDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMVLGLVAIIIFVTLSAG ECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure METILLFAPLVGALICGFSWRLIGEQAACVIATGFLFLSCLLSWVVFIGFEGETYTRSLF CCCEEHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TWIESGTLFTDWAIRVDRLTAIMLIVITSVSALVHLYSFGYMAHDENFKEGESYRPRFFA HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH YLSFFTFTMLMLVTADNLLQLFFGWEGVGVASYLLIGFYFRKPSAGAAAMKAFIVNRVGD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH FGFLLGIFALFWMTDSIQFDVVLGMGAELAEMSIIFLGMELNAAETIAFLLFIGAMGKSA HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHCCCCCC QLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPLAGNFIIIIGALSA EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEHHHHHHH FVAATIGLVQNDIKRVIAYSTMSQLGYMFVAAGVGVYSVAMFHLLTHAFFKAMLFLGAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VIHAMHHEQDMRNYGGLRKKIPYTFWAMMIGTLAITGVGIPLLYVGFPVGFAGFVSKDAV HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH IESAYAFGGDLGQFAFWALVIGALFTSFYSWRLMFLTFYGEARGNKHTHEHAHESPMTML HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCCEEE IPLGALAIGAVVAGMVWYGSFFGKTNYVAQFFGVPYAVEEAHGDEHADDHSGEDAHGAEE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCCCHH QAEDHAAGGGHGDDPHYVFTGAPGEGAIHHAPDNHVLNDAHSVPNWVKVAPFVAMVLGFA HHHHCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHH TAYLFYILKPSIPGRLATQQKPLYNFLLNKWYFDEAYEYLFIKPAQWLGRFLWKRGDTNT HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEEHHHHHHHHHHHCCCCCE IDGSINGLAMGIIPFFTRLAGRAQSGYIFHYAFAMVLGLVAIIIFVTLSAG ECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8566820 [H]